Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC188H7C350 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC188H7C350 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CCDC188H7C350 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CCDC188H7C350 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CCDC188H7C350 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CCDC188H7C350 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC188H7C350 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CCDC188H7C350 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CCDC188H7C350 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.8■□□□□ 0.12
CCDC188H7C350 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 ALG1L5P-201ENST00000482043 771 ntBASIC15.8■□□□□ 0.12
CCDC188H7C350 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC188H7C350 AC093520.2-201ENST00000561830 333 ntBASIC15.8■□□□□ 0.12
CCDC188H7C350 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.8■□□□□ 0.12
CCDC188H7C350 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC188H7C350 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC188H7C350 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC188H7C350 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CCDC188H7C350 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCDC188H7C350 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC188H7C350 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.8■□□□□ 0.12
CCDC188H7C350 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC188H7C350 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC188H7C350 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC188H7C350 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC188H7C350 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC188H7C350 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC188H7C350 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC188H7C350 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC188H7C350 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC188H7C350 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC188H7C350 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.79■□□□□ 0.12
CCDC188H7C350 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC188H7C350 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC188H7C350 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC188H7C350 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC188H7C350 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC188H7C350 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
CCDC188H7C350 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.79■□□□□ 0.12
CCDC188H7C350 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CCDC188H7C350 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC188H7C350 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC188H7C350 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC188H7C350 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC188H7C350 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC188H7C350 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.79■□□□□ 0.12
CCDC188H7C350 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC188H7C350 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC188H7C350 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC188H7C350 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC188H7C350 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC188H7C350 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC188H7C350 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC188H7C350 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC188H7C350 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC188H7C350 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC188H7C350 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC188H7C350 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC188H7C350 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CCDC188H7C350 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms