Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HCFC2Q9Y5Z7 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 KRT8P21-201ENST00000430398 1491 ntBASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 RN7SL8P-201ENST00000461771 266 ntBASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 PGAM1P5-201ENST00000548011 764 ntBASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 AC103810.10-201ENST00000606504 343 ntBASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 MIR6720-201ENST00000611664 98 ntBASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 AC007718.1-201ENST00000621078 280 ntBASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 AP005117.1-202ENST00000581724 1908 ntBASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HCFC2Q9Y5Z7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 OR2K2-202ENST00000374428 1038 ntBASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 RN7SL258P-201ENST00000478664 300 ntBASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 AC135983.4-201ENST00000564116 1262 ntBASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HCFC2Q9Y5Z7 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms