Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 AC003101.2-201ENST00000612557 442 ntBASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 MIR6069-201ENST00000620069 79 ntBASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
UBE2D4Q9Y2X8 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 AC011474.4-201ENST00000623523 2076 ntBASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 MBLAC2-202ENST00000514906 1936 ntBASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 AC015922.1-201ENST00000421102 1152 ntBASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 AL590627.1-203ENST00000421194 1026 ntBASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 MCCD1P2-201ENST00000423228 335 ntBASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 KRT18P64-201ENST00000434946 1219 ntBASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 KRT18P43-201ENST00000469825 1281 ntBASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 AC007967.4-201ENST00000614700 386 ntBASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.61□□□□□ -0.71
UBE2D4Q9Y2X8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
UBE2D4Q9Y2X8 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms