Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHA4Q9UN74 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 AC244669.2-201ENST00000612320 853 ntBASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHA4Q9UN74 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 CICP14-201ENST00000629111 2732 ntBASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 KRT43P-201ENST00000434019 910 ntBASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 C2orf27AP3-201ENST00000434123 579 ntBASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 AC016694.1-201ENST00000434179 700 ntBASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 U91328.1-201ENST00000437528 223 ntBASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 AC007551.1-201ENST00000457394 519 ntBASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 AL354718.3-201ENST00000616414 581 ntBASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 AL162274.1-201ENST00000617191 1098 ntBASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 CR382287.1-201ENST00000623954 586 ntBASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHA4Q9UN74 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PCDHA4Q9UN74 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms