Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
DUX4Q9UBX2 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.48□□□□□ -0.25
DUX4Q9UBX2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
DUX4Q9UBX2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.48□□□□□ -0.25
DUX4Q9UBX2 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DUX4Q9UBX2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
DUX4Q9UBX2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DUX4Q9UBX2 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 AC134407.2-201ENST00000625089 1978 ntBASIC13.47□□□□□ -0.25
DUX4Q9UBX2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 AC105021.1-202ENST00000570572 669 ntBASIC13.47□□□□□ -0.25
DUX4Q9UBX2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 AC117489.1-201ENST00000625169 3217 ntBASIC13.47□□□□□ -0.25
DUX4Q9UBX2 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.47□□□□□ -0.25
DUX4Q9UBX2 AC006504.5-208ENST00000588784 2401 ntBASIC13.47□□□□□ -0.25
DUX4Q9UBX2 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 TUBB3P1-201ENST00000405796 1332 ntBASIC13.46□□□□□ -0.25
DUX4Q9UBX2 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.46□□□□□ -0.25
DUX4Q9UBX2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 SPDYE7P-202ENST00000420373 878 ntBASIC13.46□□□□□ -0.25
DUX4Q9UBX2 MTND6P24-201ENST00000440466 518 ntBASIC13.46□□□□□ -0.25
DUX4Q9UBX2 AC125807.1-201ENST00000483097 614 ntBASIC13.46□□□□□ -0.25
DUX4Q9UBX2 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.46□□□□□ -0.25
DUX4Q9UBX2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 AC025678.2-201ENST00000562061 970 ntBASIC13.46□□□□□ -0.25
DUX4Q9UBX2 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DUX4Q9UBX2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms