Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 IL9RP3-201ENST00000442856 1674 ntBASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CXXC1Q9P0U4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 REXO1L4P-201ENST00000605109 1937 ntBASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 BANF1P3-201ENST00000412556 261 ntBASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 AL645933.1-201ENST00000440087 609 ntBASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 MRPL22P1-201ENST00000505398 616 ntBASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 MIR5196-201ENST00000578146 115 ntBASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 DGAT2L7P-201ENST00000602462 744 ntBASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 FO393412.1-201ENST00000619841 382 ntBASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.04■□□□□ 0.16
CXXC1Q9P0U4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 KRT18P9-201ENST00000604826 1300 ntBASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 CICP13-201ENST00000422015 2789 ntBASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 RPSAP15-201ENST00000448168 861 ntBASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 DUTP3-201ENST00000450025 415 ntBASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 MIR3180-2-201ENST00000581748 88 ntBASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 AC007326.1-201ENST00000604539 458 ntBASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 AC027601.3-201ENST00000622907 509 ntBASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 LINC00431-202ENST00000636375 159 ntBASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CXXC1Q9P0U4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CXXC1Q9P0U4 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CXXC1Q9P0U4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CXXC1Q9P0U4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms