Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 NUS1P3-201ENST00000423502 862 ntBASIC12.6□□□□□ -0.39
CALYQ9NYX4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 SPCS2P1-201ENST00000561636 679 ntBASIC12.6□□□□□ -0.39
CALYQ9NYX4 LINC02560-201ENST00000596379 459 ntBASIC12.6□□□□□ -0.39
CALYQ9NYX4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 AC007686.3-201ENST00000619017 3487 ntBASIC12.6□□□□□ -0.39
CALYQ9NYX4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 REXO1L5P-201ENST00000622260 2098 ntBASIC12.6□□□□□ -0.39
CALYQ9NYX4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CALYQ9NYX4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CALYQ9NYX4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 SOCS2P1-201ENST00000417727 557 ntBASIC12.59□□□□□ -0.39
CALYQ9NYX4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 AC092552.1-201ENST00000547243 906 ntBASIC12.59□□□□□ -0.39
CALYQ9NYX4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 AC008761.3-201ENST00000624803 892 ntBASIC12.59□□□□□ -0.39
CALYQ9NYX4 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 CICP14-201ENST00000629111 2732 ntBASIC12.59□□□□□ -0.39
CALYQ9NYX4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CALYQ9NYX4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
CALYQ9NYX4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms