Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 ACTBP8-201ENST00000403258 1108 ntBASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 AC145423.3-201ENST00000615987 467 ntBASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 PRSS30P-206ENST00000641773 873 ntBASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ZNF304Q9HCX3 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 LRRC59-203ENST00000576448 1531 ntBASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 AL139094.1-201ENST00000405549 1188 ntBASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 RPL7P3-201ENST00000441388 714 ntBASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 AL161772.1-201ENST00000610494 4412 ntBASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 AC007950.2-201ENST00000615045 2347 ntBASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ZNF304Q9HCX3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms