Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.29■□□□□ 0.2
NXF3Q9H4D5 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.29■□□□□ 0.2
NXF3Q9H4D5 POM121L10P-201ENST00000436994 1285 ntBASIC16.29■□□□□ 0.2
NXF3Q9H4D5 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 AC103810.3-201ENST00000583567 96 ntBASIC16.29■□□□□ 0.2
NXF3Q9H4D5 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.29■□□□□ 0.2
NXF3Q9H4D5 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.29■□□□□ 0.2
NXF3Q9H4D5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.28■□□□□ 0.2
NXF3Q9H4D5 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 AC004898.1-201ENST00000451057 766 ntBASIC16.28■□□□□ 0.2
NXF3Q9H4D5 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 AC002472.3-201ENST00000640124 621 ntBASIC16.28■□□□□ 0.2
NXF3Q9H4D5 AC013268.4-201ENST00000637413 2228 ntBASIC16.28■□□□□ 0.2
NXF3Q9H4D5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 AL109954.1-202ENST00000564051 2148 ntBASIC16.28■□□□□ 0.2
NXF3Q9H4D5 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.28■□□□□ 0.2
NXF3Q9H4D5 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NXF3Q9H4D5 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NXF3Q9H4D5 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.27■□□□□ 0.2
NXF3Q9H4D5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NXF3Q9H4D5 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NXF3Q9H4D5 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NXF3Q9H4D5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NXF3Q9H4D5 AL138725.1-201ENST00000407347 1314 ntBASIC16.27■□□□□ 0.2
NXF3Q9H4D5 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NXF3Q9H4D5 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NXF3Q9H4D5 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NXF3Q9H4D5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
NXF3Q9H4D5 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms