Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 DNAJB3-201ENST00000446806 729 ntBASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 AC022145.2-201ENST00000598203 171 ntBASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 AL133215.2-201ENST00000609242 977 ntBASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 LINC01230-201ENST00000625222 3017 ntBASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COMMD4Q9H0A8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 RBPMS2P1-201ENST00000437762 623 ntBASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 CEND1P1-201ENST00000451006 455 ntBASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 KRT18P43-201ENST00000469825 1281 ntBASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 AC105339.1-204ENST00000636249 355 ntBASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COMMD4Q9H0A8 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms