Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 GPX1P2-201ENST00000429271 606 ntBASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 TOB2P1-201ENST00000469761 992 ntBASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 AC007688.1-201ENST00000475592 759 ntBASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 PNN-202ENST00000553331 656 ntTSL 3 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 AC138894.3-201ENST00000603787 634 ntBASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 AC103798.2-201ENST00000624292 632 ntBASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 OPA3-201ENST00000263275 7828 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 PMS2P7-201ENST00000506558 1336 ntBASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
LCE3DQ9BYE3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms