Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HDHD3Q9BSH5 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 AL157414.3-201ENST00000624276 1954 ntBASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 AL645728.2-202ENST00000641679 227 ntBASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
HDHD3Q9BSH5 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 AC136759.1-202ENST00000530858 2194 ntBASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 AC010336.2-201ENST00000564226 506 ntBASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 AC051619.7-201ENST00000568314 623 ntBASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 MIR3687-2-201ENST00000577708 61 ntBASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 AC074044.1-201ENST00000609673 707 ntBASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 TEX28P1-201ENST00000613479 1221 ntBASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 MIR3687-1-201ENST00000614492 61 ntBASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 TEX28P2-201ENST00000617764 1221 ntBASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
HDHD3Q9BSH5 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms