Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 COL6A4P2-202ENST00000504443 2753 ntBASIC14.83□□□□□ -0.04
EBF4Q9BQW3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
EBF4Q9BQW3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 AL121723.1-201ENST00000445194 1519 ntBASIC14.82□□□□□ -0.04
EBF4Q9BQW3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 DGCR9-201ENST00000609630 2415 ntBASIC14.82□□□□□ -0.04
EBF4Q9BQW3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 AC099521.3-201ENST00000624251 2938 ntBASIC14.82□□□□□ -0.04
EBF4Q9BQW3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 YBX2P1-201ENST00000394192 760 ntBASIC14.82□□□□□ -0.04
EBF4Q9BQW3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
EBF4Q9BQW3 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 FAM58DP-201ENST00000428076 619 ntBASIC14.81□□□□□ -0.04
EBF4Q9BQW3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 FAM197Y3-203ENST00000618346 717 ntBASIC14.81□□□□□ -0.04
EBF4Q9BQW3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.81□□□□□ -0.04
EBF4Q9BQW3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms