Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 NKAPP1-205ENST00000585790 367 ntBASIC14.36□□□□□ -0.11
NR1H4Q96RI1 MTDHP3-201ENST00000594186 672 ntBASIC14.36□□□□□ -0.11
NR1H4Q96RI1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NR1H4Q96RI1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 MIR1224-201ENST00000408193 85 ntBASIC14.35□□□□□ -0.11
NR1H4Q96RI1 UPK3BP1-201ENST00000428678 509 ntBASIC14.35□□□□□ -0.11
NR1H4Q96RI1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.35□□□□□ -0.11
NR1H4Q96RI1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.35□□□□□ -0.11
NR1H4Q96RI1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 AC129492.6-201ENST00000611383 1305 ntBASIC14.35□□□□□ -0.11
NR1H4Q96RI1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 AL589702.1-201ENST00000641229 1509 ntBASIC14.35□□□□□ -0.11
NR1H4Q96RI1 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NR1H4Q96RI1 PI4KAP1-204ENST00000612579 1703 ntBASIC14.35□□□□□ -0.11
NR1H4Q96RI1 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms