Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 AC107890.1-201ENST00000422478 521 ntBASIC13.94□□□□□ -0.18
SNX18Q96RF0 MTND6P24-201ENST00000440466 518 ntBASIC13.94□□□□□ -0.18
SNX18Q96RF0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 AC015910.1-201ENST00000579400 975 ntBASIC13.94□□□□□ -0.18
SNX18Q96RF0 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 MIR6080-201ENST00000617359 66 ntBASIC13.94□□□□□ -0.18
SNX18Q96RF0 CETN4P-206ENST00000642099 2168 ntBASIC13.94□□□□□ -0.18
SNX18Q96RF0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 AL139385.1-201ENST00000611744 3272 ntBASIC13.94□□□□□ -0.18
SNX18Q96RF0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 AL133267.1-201ENST00000398220 340 ntBASIC13.93□□□□□ -0.18
SNX18Q96RF0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 AL080243.2-201ENST00000418783 582 ntBASIC13.93□□□□□ -0.18
SNX18Q96RF0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 INGX-202ENST00000489074 768 ntBASIC13.93□□□□□ -0.18
SNX18Q96RF0 IGHV3-42-201ENST00000520410 361 ntBASIC13.93□□□□□ -0.18
SNX18Q96RF0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 MIR4745-201ENST00000577608 62 ntBASIC13.93□□□□□ -0.18
SNX18Q96RF0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 AL390955.2-201ENST00000603032 514 ntBASIC13.93□□□□□ -0.18
SNX18Q96RF0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
SNX18Q96RF0 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SNX18Q96RF0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms