Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
RNF183Q96D59 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 AC073347.1-201ENST00000421633 2643 ntBASIC11.38□□□□□ -0.59
RNF183Q96D59 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.37□□□□□ -0.59
RNF183Q96D59 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
RNF183Q96D59 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
RNF183Q96D59 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 AC023157.3-201ENST00000619086 2088 ntBASIC11.37□□□□□ -0.59
RNF183Q96D59 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
RNF183Q96D59 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 AP005117.1-202ENST00000581724 1908 ntBASIC11.37□□□□□ -0.59
RNF183Q96D59 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 TK1-203ENST00000588734 1681 ntTSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
RNF183Q96D59 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 ARSEP1-201ENST00000420443 635 ntBASIC11.37□□□□□ -0.59
RNF183Q96D59 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC11.37□□□□□ -0.59
RNF183Q96D59 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC11.37□□□□□ -0.59
RNF183Q96D59 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC11.37□□□□□ -0.59
RNF183Q96D59 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC11.37□□□□□ -0.59
RNF183Q96D59 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.37□□□□□ -0.59
RNF183Q96D59 KRT17P8-201ENST00000540749 863 ntBASIC11.37□□□□□ -0.59
RNF183Q96D59 RAB43P1-201ENST00000561790 589 ntBASIC11.37□□□□□ -0.59
RNF183Q96D59 AL359711.2-201ENST00000563105 872 ntBASIC11.37□□□□□ -0.59
RNF183Q96D59 MIR4313-201ENST00000580760 101 ntBASIC11.37□□□□□ -0.59
RNF183Q96D59 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.37□□□□□ -0.59
RNF183Q96D59 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.37□□□□□ -0.59
RNF183Q96D59 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC11.37□□□□□ -0.59
RNF183Q96D59 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RNF183Q96D59 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
RNF183Q96D59 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC11.37□□□□□ -0.59
RNF183Q96D59 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.36□□□□□ -0.59
RNF183Q96D59 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC11.36□□□□□ -0.59
RNF183Q96D59 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.36□□□□□ -0.59
RNF183Q96D59 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
RNF183Q96D59 AC087386.2-201ENST00000623212 4637 ntBASIC11.36□□□□□ -0.59
RNF183Q96D59 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
RNF183Q96D59 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.36□□□□□ -0.59
RNF183Q96D59 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC11.36□□□□□ -0.59
RNF183Q96D59 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
RNF183Q96D59 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
RNF183Q96D59 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.36□□□□□ -0.59
RNF183Q96D59 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.36□□□□□ -0.59
RNF183Q96D59 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
RNF183Q96D59 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC11.36□□□□□ -0.59
RNF183Q96D59 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RNF183Q96D59 IGHV3-71-201ENST00000523324 359 ntBASIC11.36□□□□□ -0.59
RNF183Q96D59 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC11.36□□□□□ -0.59
RNF183Q96D59 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms