Protein–RNA interactions for Protein: Q92973

TNPO1, Transportin-1, humanhuman

Known RBP Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1Q92973 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.12■□□□□ 0.49
TNPO1Q92973 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TNPO1Q92973 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNPO1Q92973 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNPO1Q92973 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNPO1Q92973 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TNPO1Q92973 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TNPO1Q92973 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC18.12■□□□□ 0.49
TNPO1Q92973 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TNPO1Q92973 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TNPO1Q92973 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TNPO1Q92973 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TNPO1Q92973 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNPO1Q92973 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC18.11■□□□□ 0.49
TNPO1Q92973 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TNPO1Q92973 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNPO1Q92973 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNPO1Q92973 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.11■□□□□ 0.49
TNPO1Q92973 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.11■□□□□ 0.49
TNPO1Q92973 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.11■□□□□ 0.49
TNPO1Q92973 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNPO1Q92973 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.11■□□□□ 0.49
TNPO1Q92973 ZNF890P-202ENST00000530367 1156 ntBASIC18.11■□□□□ 0.49
TNPO1Q92973 AC004233.3-201ENST00000607794 1269 ntBASIC18.11■□□□□ 0.49
TNPO1Q92973 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TNPO1Q92973 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
TNPO1Q92973 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.11■□□□□ 0.49
TNPO1Q92973 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.11■□□□□ 0.49
TNPO1Q92973 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNPO1Q92973 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TNPO1Q92973 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TNPO1Q92973 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC18.11■□□□□ 0.49
TNPO1Q92973 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TNPO1Q92973 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TNPO1Q92973 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TNPO1Q92973 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNPO1Q92973 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TNPO1Q92973 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TNPO1Q92973 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC18.1■□□□□ 0.49
TNPO1Q92973 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC18.1■□□□□ 0.49
TNPO1Q92973 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TNPO1Q92973 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.1■□□□□ 0.49
TNPO1Q92973 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.1■□□□□ 0.49
TNPO1Q92973 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.1■□□□□ 0.49
TNPO1Q92973 MRPS18AP1-201ENST00000414458 589 ntBASIC18.1■□□□□ 0.49
TNPO1Q92973 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.1■□□□□ 0.49
TNPO1Q92973 AC009477.1-201ENST00000452936 217 ntBASIC18.1■□□□□ 0.49
TNPO1Q92973 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.1■□□□□ 0.49
TNPO1Q92973 BANF1P1-201ENST00000553684 263 ntBASIC18.1■□□□□ 0.49
TNPO1Q92973 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.1■□□□□ 0.49
TNPO1Q92973 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
TNPO1Q92973 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TNPO1Q92973 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC18.1■□□□□ 0.49
TNPO1Q92973 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC18.1■□□□□ 0.49
TNPO1Q92973 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TNPO1Q92973 CICP17-201ENST00000418553 2377 ntBASIC18.1■□□□□ 0.49
TNPO1Q92973 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
TNPO1Q92973 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.1■□□□□ 0.49
TNPO1Q92973 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TNPO1Q92973 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC18.1■□□□□ 0.49
TNPO1Q92973 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNPO1Q92973 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.09■□□□□ 0.49
TNPO1Q92973 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNPO1Q92973 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNPO1Q92973 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TNPO1Q92973 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNPO1Q92973 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TNPO1Q92973 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.09■□□□□ 0.49
TNPO1Q92973 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNPO1Q92973 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC18.09■□□□□ 0.49
TNPO1Q92973 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.09■□□□□ 0.49
TNPO1Q92973 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
TNPO1Q92973 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNPO1Q92973 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TNPO1Q92973 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TNPO1Q92973 NFIC-211ENST00000641145 8399 ntBASIC18.09■□□□□ 0.49
TNPO1Q92973 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TNPO1Q92973 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TNPO1Q92973 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms