Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HPS1Q92902 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.07□□□□□ -0.16
HPS1Q92902 AC090616.6-203ENST00000579186 1945 ntBASIC14.07□□□□□ -0.16
HPS1Q92902 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.07□□□□□ -0.16
HPS1Q92902 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HPS1Q92902 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.07□□□□□ -0.16
HPS1Q92902 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HPS1Q92902 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HPS1Q92902 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.07□□□□□ -0.16
HPS1Q92902 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.07□□□□□ -0.16
HPS1Q92902 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
HPS1Q92902 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.07□□□□□ -0.16
HPS1Q92902 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.07□□□□□ -0.16
HPS1Q92902 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.07□□□□□ -0.16
HPS1Q92902 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HPS1Q92902 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HPS1Q92902 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.07□□□□□ -0.16
HPS1Q92902 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.07□□□□□ -0.16
HPS1Q92902 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.07□□□□□ -0.16
HPS1Q92902 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.07□□□□□ -0.16
HPS1Q92902 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.07□□□□□ -0.16
HPS1Q92902 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.07□□□□□ -0.16
HPS1Q92902 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.07□□□□□ -0.16
HPS1Q92902 RARRES2P8-201ENST00000566335 367 ntBASIC14.07□□□□□ -0.16
HPS1Q92902 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HPS1Q92902 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.07□□□□□ -0.16
HPS1Q92902 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.07□□□□□ -0.16
HPS1Q92902 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.07□□□□□ -0.16
HPS1Q92902 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.07□□□□□ -0.16
HPS1Q92902 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
HPS1Q92902 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
HPS1Q92902 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HPS1Q92902 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.07□□□□□ -0.16
HPS1Q92902 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HPS1Q92902 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.06□□□□□ -0.16
HPS1Q92902 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.06□□□□□ -0.16
HPS1Q92902 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.06□□□□□ -0.16
HPS1Q92902 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HPS1Q92902 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
HPS1Q92902 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.06□□□□□ -0.16
HPS1Q92902 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.06□□□□□ -0.16
HPS1Q92902 TFAMP1-201ENST00000412727 736 ntBASIC14.06□□□□□ -0.16
HPS1Q92902 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.06□□□□□ -0.16
HPS1Q92902 AL592309.1-201ENST00000443127 649 ntBASIC14.06□□□□□ -0.16
HPS1Q92902 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.06□□□□□ -0.16
HPS1Q92902 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC14.06□□□□□ -0.16
HPS1Q92902 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
HPS1Q92902 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.06□□□□□ -0.16
HPS1Q92902 SPCS2P1-201ENST00000561636 679 ntBASIC14.06□□□□□ -0.16
HPS1Q92902 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.06□□□□□ -0.16
HPS1Q92902 AL096865.1-201ENST00000606796 927 ntBASIC14.06□□□□□ -0.16
HPS1Q92902 AC020765.3-201ENST00000613051 740 ntBASIC14.06□□□□□ -0.16
HPS1Q92902 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.06□□□□□ -0.16
HPS1Q92902 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.06□□□□□ -0.16
HPS1Q92902 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.06□□□□□ -0.16
HPS1Q92902 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.06□□□□□ -0.16
HPS1Q92902 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.06□□□□□ -0.16
HPS1Q92902 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HPS1Q92902 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.06□□□□□ -0.16
HPS1Q92902 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HPS1Q92902 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms