Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHC3Q92529 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.15■□□□□ 0.18
SHC3Q92529 KRT18P25-201ENST00000508931 1278 ntBASIC16.15■□□□□ 0.18
SHC3Q92529 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SHC3Q92529 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SHC3Q92529 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.15■□□□□ 0.18
SHC3Q92529 AC009486.1-201ENST00000569860 813 ntBASIC16.15■□□□□ 0.18
SHC3Q92529 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SHC3Q92529 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.15■□□□□ 0.18
SHC3Q92529 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHC3Q92529 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHC3Q92529 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHC3Q92529 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SHC3Q92529 KRT8P35-201ENST00000483942 1338 ntBASIC16.15■□□□□ 0.18
SHC3Q92529 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.15■□□□□ 0.18
SHC3Q92529 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHC3Q92529 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.15■□□□□ 0.18
SHC3Q92529 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SHC3Q92529 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.14■□□□□ 0.18
SHC3Q92529 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SHC3Q92529 LRRC59-203ENST00000576448 1531 ntBASIC16.14■□□□□ 0.18
SHC3Q92529 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.14■□□□□ 0.17
SHC3Q92529 MSTO2P-201ENST00000314835 1709 ntBASIC16.14■□□□□ 0.17
SHC3Q92529 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SHC3Q92529 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
SHC3Q92529 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
SHC3Q92529 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
SHC3Q92529 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SHC3Q92529 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.14■□□□□ 0.17
SHC3Q92529 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.14■□□□□ 0.17
SHC3Q92529 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SHC3Q92529 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.14■□□□□ 0.17
SHC3Q92529 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.14■□□□□ 0.17
SHC3Q92529 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.14■□□□□ 0.17
SHC3Q92529 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.14■□□□□ 0.17
SHC3Q92529 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.14■□□□□ 0.17
SHC3Q92529 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SHC3Q92529 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SHC3Q92529 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHC3Q92529 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SHC3Q92529 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.14■□□□□ 0.17
SHC3Q92529 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.13■□□□□ 0.17
SHC3Q92529 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.13■□□□□ 0.17
SHC3Q92529 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.13■□□□□ 0.17
SHC3Q92529 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.13■□□□□ 0.17
SHC3Q92529 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.13■□□□□ 0.17
SHC3Q92529 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.13■□□□□ 0.17
SHC3Q92529 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SHC3Q92529 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SHC3Q92529 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.13■□□□□ 0.17
SHC3Q92529 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.13■□□□□ 0.17
SHC3Q92529 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.13■□□□□ 0.17
SHC3Q92529 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SHC3Q92529 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.13■□□□□ 0.17
SHC3Q92529 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SHC3Q92529 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SHC3Q92529 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 AP001267.2-201ENST00000532619 2086 ntBASIC16.13■□□□□ 0.17
SHC3Q92529 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.13■□□□□ 0.17
SHC3Q92529 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SHC3Q92529 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.13■□□□□ 0.17
SHC3Q92529 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHC3Q92529 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms