Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
DDX1Q92499 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
DDX1Q92499 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
DDX1Q92499 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
DDX1Q92499 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
DDX1Q92499 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.13■□□□□ 0.17
DDX1Q92499 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.13■□□□□ 0.17
DDX1Q92499 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.13■□□□□ 0.17
DDX1Q92499 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.13■□□□□ 0.17
DDX1Q92499 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.13■□□□□ 0.17
DDX1Q92499 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
DDX1Q92499 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 KLF2P2-201ENST00000416807 1039 ntBASIC16.13■□□□□ 0.17
DDX1Q92499 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 EIF3FP3-201ENST00000434851 1086 ntBASIC16.13■□□□□ 0.17
DDX1Q92499 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.13■□□□□ 0.17
DDX1Q92499 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.13■□□□□ 0.17
DDX1Q92499 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
DDX1Q92499 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.13■□□□□ 0.17
DDX1Q92499 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.13■□□□□ 0.17
DDX1Q92499 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.13■□□□□ 0.17
DDX1Q92499 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.13■□□□□ 0.17
DDX1Q92499 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.13■□□□□ 0.17
DDX1Q92499 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.13■□□□□ 0.17
DDX1Q92499 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
DDX1Q92499 AC007686.3-201ENST00000619017 3487 ntBASIC16.13■□□□□ 0.17
DDX1Q92499 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
DDX1Q92499 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
DDX1Q92499 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.13■□□□□ 0.17
DDX1Q92499 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
DDX1Q92499 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
DDX1Q92499 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DDX1Q92499 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DDX1Q92499 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DDX1Q92499 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DDX1Q92499 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
DDX1Q92499 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
DDX1Q92499 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.12■□□□□ 0.17
DDX1Q92499 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
DDX1Q92499 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DDX1Q92499 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DDX1Q92499 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
DDX1Q92499 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DDX1Q92499 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.12■□□□□ 0.17
DDX1Q92499 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.12■□□□□ 0.17
DDX1Q92499 AC114812.1-204ENST00000449669 728 ntBASIC16.12■□□□□ 0.17
DDX1Q92499 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.12■□□□□ 0.17
DDX1Q92499 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.12■□□□□ 0.17
DDX1Q92499 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.12■□□□□ 0.17
DDX1Q92499 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.12■□□□□ 0.17
DDX1Q92499 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.12■□□□□ 0.17
DDX1Q92499 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.12■□□□□ 0.17
DDX1Q92499 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.12■□□□□ 0.17
DDX1Q92499 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.12■□□□□ 0.17
DDX1Q92499 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
DDX1Q92499 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
DDX1Q92499 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
DDX1Q92499 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DDX1Q92499 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DDX1Q92499 TUBB1P2-201ENST00000422712 1306 ntBASIC16.12■□□□□ 0.17
DDX1Q92499 TUBB1P1-201ENST00000503144 1300 ntBASIC16.12■□□□□ 0.17
DDX1Q92499 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
DDX1Q92499 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DDX1Q92499 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.12■□□□□ 0.17
DDX1Q92499 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
DDX1Q92499 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
DDX1Q92499 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DDX1Q92499 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.11■□□□□ 0.17
DDX1Q92499 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
DDX1Q92499 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
DDX1Q92499 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DDX1Q92499 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.11■□□□□ 0.17
DDX1Q92499 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms