Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DNAAF1Q8NEP3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 AP001267.2-201ENST00000532619 2086 ntBASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
DNAAF1Q8NEP3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 AC136759.1-202ENST00000530858 2194 ntBASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 AC026150.2-201ENST00000564693 1156 ntBASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 AL928921.2-201ENST00000641325 2442 ntBASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
DNAAF1Q8NEP3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
DNAAF1Q8NEP3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms