Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AL096865.1-201ENST00000606796 927 ntBASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF440Q8IYI8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 LINC02228-204ENST00000642115 2962 ntBASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 AL359258.3-201ENST00000622910 2331 ntBASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 AC022616.1-201ENST00000518688 554 ntBASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 MIR8072-201ENST00000614241 80 ntBASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 AC008761.3-201ENST00000624803 892 ntBASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 AC018442.1-201ENST00000421439 2061 ntBASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 AC232323.1-201ENST00000540724 2099 ntBASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 REXO1L5P-201ENST00000622260 2098 ntBASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 CICP14-201ENST00000629111 2732 ntBASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF440Q8IYI8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
ZNF440Q8IYI8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 AL157414.3-201ENST00000624276 1954 ntBASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 AC018665.1-201ENST00000622927 1362 ntBASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 MYCLP2-201ENST00000449268 967 ntBASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 AP001582.1-201ENST00000525856 295 ntBASIC13.89□□□□□ -0.19
ZNF440Q8IYI8 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms