Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 AP002414.2-201ENST00000591780 3365 ntBASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 AC099336.1-201ENST00000417053 1171 ntBASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 CD8B2-202ENST00000417670 633 ntBASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 AC006453.4-201ENST00000636949 1252 ntBASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 AC099063.4-201ENST00000641099 1602 ntBASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
C9orf40Q8IXQ3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 TSPY26P-202ENST00000565928 3884 ntBASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 AC138466.3-201ENST00000619983 221 ntBASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
C9orf40Q8IXQ3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
C9orf40Q8IXQ3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C9orf40Q8IXQ3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C9orf40Q8IXQ3 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C9orf40Q8IXQ3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C9orf40Q8IXQ3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C9orf40Q8IXQ3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.96□□□□□ -0.18
C9orf40Q8IXQ3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.96□□□□□ -0.18
C9orf40Q8IXQ3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
C9orf40Q8IXQ3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.96□□□□□ -0.18
C9orf40Q8IXQ3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.96□□□□□ -0.18
C9orf40Q8IXQ3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.95□□□□□ -0.18
C9orf40Q8IXQ3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.95□□□□□ -0.18
C9orf40Q8IXQ3 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C9orf40Q8IXQ3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C9orf40Q8IXQ3 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
C9orf40Q8IXQ3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.95□□□□□ -0.18
C9orf40Q8IXQ3 AL354989.2-201ENST00000435838 1540 ntBASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms