Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
HIST2H3AQ71DI3 SLC7A15P-201ENST00000424028 1363 ntBASIC13.41□□□□□ -0.26
HIST2H3AQ71DI3 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST2H3AQ71DI3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST2H3AQ71DI3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST2H3AQ71DI3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HIST2H3AQ71DI3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HIST2H3AQ71DI3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST2H3AQ71DI3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.41□□□□□ -0.26
HIST2H3AQ71DI3 AL390755.1-201ENST00000623716 2027 ntBASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 AL138799.1-201ENST00000448213 1675 ntBASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 GNAQP1-201ENST00000444815 1067 ntBASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 INGX-202ENST00000489074 768 ntBASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 AC093813.1-201ENST00000605066 256 ntBASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 LILRP1-201ENST00000444199 1370 ntBASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 AC139749.1-202ENST00000617529 3139 ntBASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST2H3AQ71DI3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HIST2H3AQ71DI3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 VDAC1P7-201ENST00000462417 847 ntBASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 RPL13AP25-201ENST00000484130 612 ntBASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 AC055876.2-201ENST00000531834 546 ntBASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 AC009118.2-201ENST00000613275 655 ntBASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 PRSS30P-206ENST00000641773 873 ntBASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 AC126335.2-201ENST00000623362 4637 ntBASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
HIST2H3AQ71DI3 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms