Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 MTND6P24-201ENST00000440466 518 ntBASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 AC067863.1-201ENST00000494933 530 ntBASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 AC109322.1-201ENST00000524499 1264 ntBASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 AC105021.1-202ENST00000570572 669 ntBASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 KRT18P28-201ENST00000453838 1332 ntBASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 AC069224.1-201ENST00000566372 1715 ntBASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMEM53Q6P2H8 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 LINC02447-202ENST00000501888 2146 ntBASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 CDC14C-201ENST00000428251 1719 ntBASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 METTL21AP1-201ENST00000438852 635 ntBASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 AC008677.1-201ENST00000519230 1561 ntBASIC14.05□□□□□ -0.16
TMEM53Q6P2H8 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 AC105206.1-202ENST00000314927 2368 ntBASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMEM53Q6P2H8 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms