Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 MYCLP2-201ENST00000449268 967 ntBASIC18.16■□□□□ 0.5
RNF20Q5VTR2 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 AL359711.2-201ENST00000563105 872 ntBASIC18.16■□□□□ 0.5
RNF20Q5VTR2 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 RN7SL204P-201ENST00000582831 262 ntBASIC18.16■□□□□ 0.5
RNF20Q5VTR2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RNF20Q5VTR2 AL137783.1-201ENST00000623494 1896 ntBASIC18.16■□□□□ 0.5
RNF20Q5VTR2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 AP001582.1-201ENST00000525856 295 ntBASIC18.15■□□□□ 0.5
RNF20Q5VTR2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.15■□□□□ 0.5
RNF20Q5VTR2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF20Q5VTR2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RNF20Q5VTR2 AC232323.1-201ENST00000540724 2099 ntBASIC18.14■□□□□ 0.5
RNF20Q5VTR2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.14■□□□□ 0.5
RNF20Q5VTR2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RNF20Q5VTR2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RNF20Q5VTR2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF20Q5VTR2 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF20Q5VTR2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF20Q5VTR2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms