Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 FGD5P1-202ENST00000614866 2498 ntBASIC11.74□□□□□ -0.53
HIST1H1AQ02539 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.74□□□□□ -0.53
HIST1H1AQ02539 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 CICP8-201ENST00000455800 2813 ntBASIC11.73□□□□□ -0.53
HIST1H1AQ02539 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 RPL5P21-201ENST00000404620 815 ntBASIC11.73□□□□□ -0.53
HIST1H1AQ02539 FO393414.2-201ENST00000405153 598 ntBASIC11.73□□□□□ -0.53
HIST1H1AQ02539 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 GPS2P2-201ENST00000430745 888 ntBASIC11.73□□□□□ -0.53
HIST1H1AQ02539 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 SNHG9-202ENST00000564014 471 ntBASIC11.73□□□□□ -0.53
HIST1H1AQ02539 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 PRR29-209ENST00000582540 967 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 AL589739.1-201ENST00000607720 493 ntBASIC11.73□□□□□ -0.53
HIST1H1AQ02539 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 AL356585.2-201ENST00000625078 2396 ntBASIC11.73□□□□□ -0.53
HIST1H1AQ02539 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
HIST1H1AQ02539 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 CICP17-201ENST00000418553 2377 ntBASIC11.72□□□□□ -0.53
HIST1H1AQ02539 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.72□□□□□ -0.53
HIST1H1AQ02539 WASH3P-207ENST00000560956 1394 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms