Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA1P78396 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA1P78396 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA1P78396 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCNA1P78396 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA1P78396 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CCNA1P78396 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCNA1P78396 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.12■□□□□ 0.33
CCNA1P78396 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCNA1P78396 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.12■□□□□ 0.33
CCNA1P78396 AL118508.1-201ENST00000613502 2345 ntBASIC17.12■□□□□ 0.33
CCNA1P78396 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCNA1P78396 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.11■□□□□ 0.33
CCNA1P78396 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.11■□□□□ 0.33
CCNA1P78396 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.11■□□□□ 0.33
CCNA1P78396 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 AC244394.1-201ENST00000435000 1665 ntBASIC17.11■□□□□ 0.33
CCNA1P78396 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCNA1P78396 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.11■□□□□ 0.33
CCNA1P78396 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCNA1P78396 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCNA1P78396 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.11■□□□□ 0.33
CCNA1P78396 TLE1P1-201ENST00000422965 589 ntBASIC17.11■□□□□ 0.33
CCNA1P78396 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.11■□□□□ 0.33
CCNA1P78396 AC019193.1-201ENST00000506678 823 ntBASIC17.11■□□□□ 0.33
CCNA1P78396 AC116345.2-201ENST00000512837 523 ntBASIC17.11■□□□□ 0.33
CCNA1P78396 IGLV3-15-201ENST00000518356 244 ntBASIC17.11■□□□□ 0.33
CCNA1P78396 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.11■□□□□ 0.33
CCNA1P78396 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.11■□□□□ 0.33
CCNA1P78396 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
CCNA1P78396 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCNA1P78396 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.11■□□□□ 0.33
CCNA1P78396 AC242376.1-201ENST00000559033 726 ntBASIC17.11■□□□□ 0.33
CCNA1P78396 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.11■□□□□ 0.33
CCNA1P78396 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.11■□□□□ 0.33
CCNA1P78396 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.11■□□□□ 0.33
CCNA1P78396 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CCNA1P78396 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCNA1P78396 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.11■□□□□ 0.33
CCNA1P78396 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCNA1P78396 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.1■□□□□ 0.33
CCNA1P78396 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCNA1P78396 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.1■□□□□ 0.33
CCNA1P78396 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.1■□□□□ 0.33
CCNA1P78396 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.1■□□□□ 0.33
CCNA1P78396 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.1■□□□□ 0.33
CCNA1P78396 CEP164P1-201ENST00000455142 418 ntBASIC17.1■□□□□ 0.33
CCNA1P78396 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.1■□□□□ 0.33
CCNA1P78396 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.1■□□□□ 0.33
CCNA1P78396 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
CCNA1P78396 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.1■□□□□ 0.33
CCNA1P78396 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.1■□□□□ 0.33
CCNA1P78396 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CCNA1P78396 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.1■□□□□ 0.33
CCNA1P78396 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.1■□□□□ 0.33
CCNA1P78396 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCNA1P78396 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.1■□□□□ 0.33
CCNA1P78396 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.1■□□□□ 0.33
CCNA1P78396 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.1■□□□□ 0.33
CCNA1P78396 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CCNA1P78396 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CCNA1P78396 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.1■□□□□ 0.33
CCNA1P78396 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CCNA1P78396 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.1■□□□□ 0.33
CCNA1P78396 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCNA1P78396 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCNA1P78396 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms