Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC008761.3-201ENST00000624803 892 ntBASIC13.41□□□□□ -0.26
SEC61A1P61619 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
SEC61A1P61619 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.41□□□□□ -0.26
SEC61A1P61619 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SEC61A1P61619 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SEC61A1P61619 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.41□□□□□ -0.26
SEC61A1P61619 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SEC61A1P61619 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.41□□□□□ -0.26
SEC61A1P61619 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.4□□□□□ -0.26
SEC61A1P61619 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.4□□□□□ -0.26
SEC61A1P61619 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 AC087499.5-201ENST00000452760 1342 ntBASIC13.4□□□□□ -0.26
SEC61A1P61619 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.4□□□□□ -0.26
SEC61A1P61619 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
SEC61A1P61619 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SEC61A1P61619 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SEC61A1P61619 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.4□□□□□ -0.26
SEC61A1P61619 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.4□□□□□ -0.26
SEC61A1P61619 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
SEC61A1P61619 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.4□□□□□ -0.26
SEC61A1P61619 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.4□□□□□ -0.26
SEC61A1P61619 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.4□□□□□ -0.26
SEC61A1P61619 AC009477.1-201ENST00000452936 217 ntBASIC13.4□□□□□ -0.26
SEC61A1P61619 AL139010.1-201ENST00000454878 894 ntBASIC13.4□□□□□ -0.26
SEC61A1P61619 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.4□□□□□ -0.26
SEC61A1P61619 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.4□□□□□ -0.26
SEC61A1P61619 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.4□□□□□ -0.26
SEC61A1P61619 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.4□□□□□ -0.26
SEC61A1P61619 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.4□□□□□ -0.26
SEC61A1P61619 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 AL512361.1-201ENST00000554200 418 ntBASIC13.4□□□□□ -0.26
SEC61A1P61619 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.4□□□□□ -0.26
SEC61A1P61619 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.4□□□□□ -0.26
SEC61A1P61619 AC009407.1-201ENST00000568958 598 ntBASIC13.4□□□□□ -0.26
SEC61A1P61619 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.4□□□□□ -0.26
SEC61A1P61619 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.4□□□□□ -0.26
SEC61A1P61619 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.4□□□□□ -0.26
SEC61A1P61619 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.4□□□□□ -0.26
SEC61A1P61619 AC008738.7-201ENST00000609744 511 ntBASIC13.4□□□□□ -0.26
SEC61A1P61619 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
SEC61A1P61619 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SEC61A1P61619 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
SEC61A1P61619 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SEC61A1P61619 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.4□□□□□ -0.26
SEC61A1P61619 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.4□□□□□ -0.26
SEC61A1P61619 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
SEC61A1P61619 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SEC61A1P61619 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.4□□□□□ -0.26
SEC61A1P61619 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SEC61A1P61619 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SEC61A1P61619 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SEC61A1P61619 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SEC61A1P61619 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.4□□□□□ -0.27
SEC61A1P61619 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SEC61A1P61619 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 AC126365.1-201ENST00000578585 1514 ntBASIC13.39□□□□□ -0.27
SEC61A1P61619 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
SEC61A1P61619 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.39□□□□□ -0.27
SEC61A1P61619 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.39□□□□□ -0.27
SEC61A1P61619 MBLAC2-202ENST00000514906 1936 ntBASIC13.39□□□□□ -0.27
SEC61A1P61619 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SEC61A1P61619 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SEC61A1P61619 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms