Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.35□□□□□ -0.11
RPS3AP61247 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.35□□□□□ -0.11
RPS3AP61247 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RPS3AP61247 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.35□□□□□ -0.11
RPS3AP61247 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.35□□□□□ -0.11
RPS3AP61247 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.35□□□□□ -0.11
RPS3AP61247 AC009477.1-201ENST00000452936 217 ntBASIC14.35□□□□□ -0.11
RPS3AP61247 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 TERF1P3-201ENST00000505638 1227 ntBASIC14.35□□□□□ -0.11
RPS3AP61247 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.35□□□□□ -0.11
RPS3AP61247 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.35□□□□□ -0.11
RPS3AP61247 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.35□□□□□ -0.11
RPS3AP61247 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 AL844908.2-201ENST00000609461 460 ntBASIC14.35□□□□□ -0.11
RPS3AP61247 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.35□□□□□ -0.11
RPS3AP61247 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.35□□□□□ -0.11
RPS3AP61247 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.35□□□□□ -0.11
RPS3AP61247 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 LINC01230-201ENST00000625222 3017 ntBASIC14.35□□□□□ -0.11
RPS3AP61247 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.35□□□□□ -0.11
RPS3AP61247 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
RPS3AP61247 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
RPS3AP61247 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.35□□□□□ -0.11
RPS3AP61247 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPS3AP61247 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.34□□□□□ -0.11
RPS3AP61247 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RPS3AP61247 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.34□□□□□ -0.11
RPS3AP61247 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RPS3AP61247 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RPS3AP61247 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.34□□□□□ -0.11
RPS3AP61247 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.34□□□□□ -0.11
RPS3AP61247 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
RPS3AP61247 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RPS3AP61247 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RPS3AP61247 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.34□□□□□ -0.11
RPS3AP61247 AL512361.1-201ENST00000554200 418 ntBASIC14.34□□□□□ -0.11
RPS3AP61247 AC010336.2-201ENST00000564226 506 ntBASIC14.34□□□□□ -0.11
RPS3AP61247 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.34□□□□□ -0.11
RPS3AP61247 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.34□□□□□ -0.11
RPS3AP61247 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.34□□□□□ -0.11
RPS3AP61247 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.34□□□□□ -0.11
RPS3AP61247 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.34□□□□□ -0.11
RPS3AP61247 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RPS3AP61247 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.34□□□□□ -0.11
RPS3AP61247 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
RPS3AP61247 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.34□□□□□ -0.11
RPS3AP61247 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RPS3AP61247 BNIP3P1-202ENST00000550043 1585 ntBASIC14.34□□□□□ -0.11
RPS3AP61247 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.34□□□□□ -0.11
RPS3AP61247 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPS3AP61247 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
RPS3AP61247 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RPS3AP61247 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RPS3AP61247 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RPS3AP61247 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms