Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL928921.2-201ENST00000641325 2442 ntBASIC10.77□□□□□ -0.69
CKS1BP61024 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
CKS1BP61024 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
CKS1BP61024 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC10.77□□□□□ -0.69
CKS1BP61024 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC10.77□□□□□ -0.69
CKS1BP61024 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
CKS1BP61024 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
CKS1BP61024 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC10.76□□□□□ -0.69
CKS1BP61024 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC10.76□□□□□ -0.69
CKS1BP61024 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC10.76□□□□□ -0.69
CKS1BP61024 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
CKS1BP61024 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 AP001282.1-201ENST00000531301 1499 ntBASIC10.76□□□□□ -0.69
CKS1BP61024 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
CKS1BP61024 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
CKS1BP61024 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC10.76□□□□□ -0.69
CKS1BP61024 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC10.76□□□□□ -0.69
CKS1BP61024 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC10.76□□□□□ -0.69
CKS1BP61024 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC10.76□□□□□ -0.69
CKS1BP61024 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 AC073621.1-201ENST00000392730 636 ntBASIC10.76□□□□□ -0.69
CKS1BP61024 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC10.76□□□□□ -0.69
CKS1BP61024 UPK3BP1-201ENST00000428678 509 ntBASIC10.76□□□□□ -0.69
CKS1BP61024 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC10.76□□□□□ -0.69
CKS1BP61024 FAM185BP-201ENST00000443595 716 ntBASIC10.76□□□□□ -0.69
CKS1BP61024 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
CKS1BP61024 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC10.76□□□□□ -0.69
CKS1BP61024 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC10.76□□□□□ -0.69
CKS1BP61024 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC10.76□□□□□ -0.69
CKS1BP61024 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC10.76□□□□□ -0.69
CKS1BP61024 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC10.76□□□□□ -0.69
CKS1BP61024 RPS29-206ENST00000557111 488 ntTSL 2 BASIC10.76□□□□□ -0.69
CKS1BP61024 RIN3-211ENST00000557762 517 ntTSL 3 BASIC10.76□□□□□ -0.69
CKS1BP61024 MIR4751-201ENST00000578027 74 ntBASIC10.76□□□□□ -0.69
CKS1BP61024 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 AC008735.5-201ENST00000623544 497 ntBASIC10.76□□□□□ -0.69
CKS1BP61024 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC10.76□□□□□ -0.69
CKS1BP61024 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
CKS1BP61024 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC10.76□□□□□ -0.69
CKS1BP61024 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 AL365181.3-201ENST00000605886 3222 ntBASIC10.76□□□□□ -0.69
CKS1BP61024 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC10.76□□□□□ -0.69
CKS1BP61024 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC10.76□□□□□ -0.69
CKS1BP61024 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
CKS1BP61024 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CKS1BP61024 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC10.76□□□□□ -0.69
CKS1BP61024 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC10.76□□□□□ -0.69
CKS1BP61024 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC10.75□□□□□ -0.69
CKS1BP61024 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 TP73-203ENST00000357733 4899 ntTSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 API5-202ENST00000420461 2009 ntTSL 2 BASIC10.75□□□□□ -0.69
CKS1BP61024 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC10.75□□□□□ -0.69
CKS1BP61024 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC10.75□□□□□ -0.69
CKS1BP61024 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CKS1BP61024 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms