Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.47□□□□□ -0.41
SPCS3P61009 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.47□□□□□ -0.41
SPCS3P61009 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.47□□□□□ -0.41
SPCS3P61009 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.47□□□□□ -0.41
SPCS3P61009 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SPCS3P61009 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.41
SPCS3P61009 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
SPCS3P61009 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.46□□□□□ -0.41
SPCS3P61009 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
SPCS3P61009 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
SPCS3P61009 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.46□□□□□ -0.41
SPCS3P61009 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.46□□□□□ -0.41
SPCS3P61009 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.46□□□□□ -0.41
SPCS3P61009 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.46□□□□□ -0.41
SPCS3P61009 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SPCS3P61009 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.46□□□□□ -0.41
SPCS3P61009 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.46□□□□□ -0.41
SPCS3P61009 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.46□□□□□ -0.41
SPCS3P61009 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.46□□□□□ -0.41
SPCS3P61009 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.46□□□□□ -0.41
SPCS3P61009 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.46□□□□□ -0.41
SPCS3P61009 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.46□□□□□ -0.41
SPCS3P61009 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.46□□□□□ -0.41
SPCS3P61009 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.46□□□□□ -0.41
SPCS3P61009 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.46□□□□□ -0.41
SPCS3P61009 AC105021.1-202ENST00000570572 669 ntBASIC12.46□□□□□ -0.41
SPCS3P61009 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.46□□□□□ -0.41
SPCS3P61009 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.46□□□□□ -0.41
SPCS3P61009 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.46□□□□□ -0.41
SPCS3P61009 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
SPCS3P61009 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.46□□□□□ -0.41
SPCS3P61009 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SPCS3P61009 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.46□□□□□ -0.42
SPCS3P61009 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
SPCS3P61009 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SPCS3P61009 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SPCS3P61009 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
SPCS3P61009 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
SPCS3P61009 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.46□□□□□ -0.42
SPCS3P61009 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SPCS3P61009 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.46□□□□□ -0.42
SPCS3P61009 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
SPCS3P61009 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.46□□□□□ -0.42
SPCS3P61009 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SPCS3P61009 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.46□□□□□ -0.42
SPCS3P61009 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.46□□□□□ -0.42
SPCS3P61009 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.46□□□□□ -0.42
SPCS3P61009 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SPCS3P61009 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
SPCS3P61009 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.46□□□□□ -0.42
SPCS3P61009 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
SPCS3P61009 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.46□□□□□ -0.42
SPCS3P61009 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SPCS3P61009 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SPCS3P61009 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
SPCS3P61009 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.45□□□□□ -0.42
SPCS3P61009 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
SPCS3P61009 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.45□□□□□ -0.42
SPCS3P61009 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SPCS3P61009 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
SPCS3P61009 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SPCS3P61009 YBX2P1-201ENST00000394192 760 ntBASIC12.45□□□□□ -0.42
SPCS3P61009 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
SPCS3P61009 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.45□□□□□ -0.42
SPCS3P61009 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.45□□□□□ -0.42
SPCS3P61009 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
SPCS3P61009 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.45□□□□□ -0.42
SPCS3P61009 AC069335.1-201ENST00000489972 472 ntBASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms