Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.65□□□□□ -0.22
CAV3P56539 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.65□□□□□ -0.22
CAV3P56539 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.65□□□□□ -0.22
CAV3P56539 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CAV3P56539 AC079781.4-201ENST00000641908 219 ntBASIC13.65□□□□□ -0.22
CAV3P56539 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
CAV3P56539 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CAV3P56539 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CAV3P56539 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.65□□□□□ -0.22
CAV3P56539 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.65□□□□□ -0.22
CAV3P56539 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CAV3P56539 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.65□□□□□ -0.22
CAV3P56539 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CAV3P56539 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.65□□□□□ -0.22
CAV3P56539 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.65□□□□□ -0.22
CAV3P56539 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CAV3P56539 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CAV3P56539 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CAV3P56539 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CAV3P56539 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CAV3P56539 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CAV3P56539 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CAV3P56539 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CAV3P56539 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CAV3P56539 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
CAV3P56539 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.64□□□□□ -0.23
CAV3P56539 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.64□□□□□ -0.23
CAV3P56539 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.64□□□□□ -0.23
CAV3P56539 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CAV3P56539 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CAV3P56539 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CAV3P56539 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.64□□□□□ -0.23
CAV3P56539 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.64□□□□□ -0.23
CAV3P56539 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.64□□□□□ -0.23
CAV3P56539 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.64□□□□□ -0.23
CAV3P56539 AC004967.1-201ENST00000453589 447 ntBASIC13.64□□□□□ -0.23
CAV3P56539 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.64□□□□□ -0.23
CAV3P56539 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CAV3P56539 IGHV3-62-201ENST00000520057 340 ntBASIC13.64□□□□□ -0.23
CAV3P56539 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CAV3P56539 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.64□□□□□ -0.23
CAV3P56539 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.64□□□□□ -0.23
CAV3P56539 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.64□□□□□ -0.23
CAV3P56539 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.64□□□□□ -0.23
CAV3P56539 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.64□□□□□ -0.23
CAV3P56539 AC027307.2-201ENST00000591252 911 ntBASIC13.64□□□□□ -0.23
CAV3P56539 AC022145.2-201ENST00000598203 171 ntBASIC13.64□□□□□ -0.23
CAV3P56539 AC097359.3-201ENST00000603982 1210 ntBASIC13.64□□□□□ -0.23
CAV3P56539 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.64□□□□□ -0.23
CAV3P56539 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.64□□□□□ -0.23
CAV3P56539 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CAV3P56539 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.64□□□□□ -0.23
CAV3P56539 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CAV3P56539 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CAV3P56539 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CAV3P56539 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.64□□□□□ -0.23
CAV3P56539 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.64□□□□□ -0.23
CAV3P56539 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.64□□□□□ -0.23
CAV3P56539 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.64□□□□□ -0.23
CAV3P56539 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CAV3P56539 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.64□□□□□ -0.23
CAV3P56539 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.64□□□□□ -0.23
CAV3P56539 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CAV3P56539 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.64□□□□□ -0.23
CAV3P56539 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.63□□□□□ -0.23
CAV3P56539 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CAV3P56539 DGCR9-201ENST00000609630 2415 ntBASIC13.63□□□□□ -0.23
CAV3P56539 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CAV3P56539 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CAV3P56539 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CAV3P56539 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CAV3P56539 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.63□□□□□ -0.23
CAV3P56539 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CAV3P56539 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CAV3P56539 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CAV3P56539 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.63□□□□□ -0.23
CAV3P56539 AC005562.1-201ENST00000583030 3219 ntBASIC13.63□□□□□ -0.23
CAV3P56539 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CAV3P56539 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CAV3P56539 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CAV3P56539 AC099521.3-201ENST00000624251 2938 ntBASIC13.63□□□□□ -0.23
CAV3P56539 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.63□□□□□ -0.23
CAV3P56539 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.63□□□□□ -0.23
CAV3P56539 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CAV3P56539 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CAV3P56539 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms