Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GSK3AP49840 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.34□□□□□ -0.27
GSK3AP49840 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GSK3AP49840 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GSK3AP49840 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GSK3AP49840 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
GSK3AP49840 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
GSK3AP49840 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GSK3AP49840 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
GSK3AP49840 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
GSK3AP49840 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
GSK3AP49840 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.33□□□□□ -0.28
GSK3AP49840 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
GSK3AP49840 ACE3P-201ENST00000423435 1973 ntBASIC13.33□□□□□ -0.28
GSK3AP49840 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.33□□□□□ -0.28
GSK3AP49840 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.33□□□□□ -0.28
GSK3AP49840 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.33□□□□□ -0.28
GSK3AP49840 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.33□□□□□ -0.28
GSK3AP49840 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.33□□□□□ -0.28
GSK3AP49840 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
GSK3AP49840 AL512638.1-201ENST00000457493 794 ntBASIC13.33□□□□□ -0.28
GSK3AP49840 MEIS3P1-201ENST00000495167 958 ntBASIC13.33□□□□□ -0.28
GSK3AP49840 AC135586.1-201ENST00000539323 574 ntBASIC13.33□□□□□ -0.28
GSK3AP49840 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.33□□□□□ -0.28
GSK3AP49840 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
GSK3AP49840 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.33□□□□□ -0.28
GSK3AP49840 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.33□□□□□ -0.28
GSK3AP49840 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.33□□□□□ -0.28
GSK3AP49840 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.33□□□□□ -0.28
GSK3AP49840 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.33□□□□□ -0.28
GSK3AP49840 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.33□□□□□ -0.28
GSK3AP49840 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
GSK3AP49840 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
GSK3AP49840 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
GSK3AP49840 AC022144.1-201ENST00000602255 1580 ntBASIC13.32□□□□□ -0.28
GSK3AP49840 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
GSK3AP49840 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.32□□□□□ -0.28
GSK3AP49840 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
GSK3AP49840 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.32□□□□□ -0.28
GSK3AP49840 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
GSK3AP49840 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GSK3AP49840 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.32□□□□□ -0.28
GSK3AP49840 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 AC012508.2-201ENST00000567613 1472 ntBASIC13.32□□□□□ -0.28
GSK3AP49840 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.32□□□□□ -0.28
GSK3AP49840 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
GSK3AP49840 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.32□□□□□ -0.28
GSK3AP49840 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.32□□□□□ -0.28
GSK3AP49840 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.32□□□□□ -0.28
GSK3AP49840 AC004890.2-204ENST00000481968 304 ntBASIC13.32□□□□□ -0.28
GSK3AP49840 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.32□□□□□ -0.28
GSK3AP49840 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.32□□□□□ -0.28
GSK3AP49840 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.32□□□□□ -0.28
GSK3AP49840 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.32□□□□□ -0.28
GSK3AP49840 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 AC008738.7-201ENST00000609744 511 ntBASIC13.32□□□□□ -0.28
GSK3AP49840 GPALPP1-207ENST00000611650 899 ntBASIC13.32□□□□□ -0.28
GSK3AP49840 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.32□□□□□ -0.28
GSK3AP49840 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
GSK3AP49840 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.32□□□□□ -0.28
GSK3AP49840 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.32□□□□□ -0.28
GSK3AP49840 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
GSK3AP49840 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.32□□□□□ -0.28
GSK3AP49840 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
GSK3AP49840 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
GSK3AP49840 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
GSK3AP49840 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms