Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.9□□□□□ -0.18
CENPAP49450 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 AC007292.2-201ENST00000593524 1812 ntBASIC13.9□□□□□ -0.18
CENPAP49450 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CENPAP49450 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.9□□□□□ -0.19
CENPAP49450 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
CENPAP49450 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.19
CENPAP49450 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CENPAP49450 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.89□□□□□ -0.19
CENPAP49450 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.89□□□□□ -0.19
CENPAP49450 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CENPAP49450 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 HIST3H2BA-201ENST00000436555 524 ntBASIC13.89□□□□□ -0.19
CENPAP49450 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.89□□□□□ -0.19
CENPAP49450 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.89□□□□□ -0.19
CENPAP49450 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CENPAP49450 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.89□□□□□ -0.19
CENPAP49450 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.89□□□□□ -0.19
CENPAP49450 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.89□□□□□ -0.19
CENPAP49450 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.89□□□□□ -0.19
CENPAP49450 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
CENPAP49450 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.89□□□□□ -0.19
CENPAP49450 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CENPAP49450 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.89□□□□□ -0.19
CENPAP49450 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.89□□□□□ -0.19
CENPAP49450 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
CENPAP49450 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.88□□□□□ -0.19
CENPAP49450 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CENPAP49450 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CENPAP49450 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.88□□□□□ -0.19
CENPAP49450 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.88□□□□□ -0.19
CENPAP49450 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CENPAP49450 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CENPAP49450 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.88□□□□□ -0.19
CENPAP49450 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CENPAP49450 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.88□□□□□ -0.19
CENPAP49450 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
CENPAP49450 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CENPAP49450 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CENPAP49450 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.88□□□□□ -0.19
CENPAP49450 AL133267.1-201ENST00000398220 340 ntBASIC13.88□□□□□ -0.19
CENPAP49450 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.88□□□□□ -0.19
CENPAP49450 GHSR-202ENST00000427970 912 ntBASIC13.88□□□□□ -0.19
CENPAP49450 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.88□□□□□ -0.19
CENPAP49450 AC004967.1-201ENST00000453589 447 ntBASIC13.88□□□□□ -0.19
CENPAP49450 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.88□□□□□ -0.19
CENPAP49450 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.88□□□□□ -0.19
CENPAP49450 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.88□□□□□ -0.19
CENPAP49450 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
CENPAP49450 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.88□□□□□ -0.19
CENPAP49450 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.88□□□□□ -0.19
CENPAP49450 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.88□□□□□ -0.19
CENPAP49450 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.88□□□□□ -0.19
CENPAP49450 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CENPAP49450 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.88□□□□□ -0.19
CENPAP49450 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.88□□□□□ -0.19
CENPAP49450 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CENPAP49450 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms