Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
SLC9A3P48764 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SLC9A3P48764 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC9A3P48764 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
SLC9A3P48764 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SLC9A3P48764 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SLC9A3P48764 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC9A3P48764 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SLC9A3P48764 AC118758.2-201ENST00000614242 2813 ntBASIC14.02□□□□□ -0.16
SLC9A3P48764 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC9A3P48764 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SLC9A3P48764 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.02□□□□□ -0.16
SLC9A3P48764 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.02□□□□□ -0.16
SLC9A3P48764 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SLC9A3P48764 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
SLC9A3P48764 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
SLC9A3P48764 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SLC9A3P48764 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SLC9A3P48764 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.02□□□□□ -0.16
SLC9A3P48764 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.02□□□□□ -0.16
SLC9A3P48764 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC9A3P48764 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC9A3P48764 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC9A3P48764 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC9A3P48764 RPL37AP1-201ENST00000412502 279 ntBASIC14.02□□□□□ -0.17
SLC9A3P48764 RPL13P2-201ENST00000440687 659 ntBASIC14.02□□□□□ -0.17
SLC9A3P48764 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC9A3P48764 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC9A3P48764 KRT18P43-201ENST00000469825 1281 ntBASIC14.02□□□□□ -0.17
SLC9A3P48764 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SLC9A3P48764 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.02□□□□□ -0.17
SLC9A3P48764 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC9A3P48764 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC9A3P48764 AC074044.1-201ENST00000609673 707 ntBASIC14.02□□□□□ -0.17
SLC9A3P48764 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC9A3P48764 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC9A3P48764 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SLC9A3P48764 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC9A3P48764 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC9A3P48764 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC9A3P48764 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC9A3P48764 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC9A3P48764 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC9A3P48764 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.02□□□□□ -0.17
SLC9A3P48764 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC9A3P48764 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC9A3P48764 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SLC9A3P48764 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
SLC9A3P48764 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.02□□□□□ -0.17
SLC9A3P48764 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
SLC9A3P48764 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC9A3P48764 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC9A3P48764 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC9A3P48764 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC9A3P48764 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SLC9A3P48764 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC9A3P48764 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC9A3P48764 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SLC9A3P48764 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC9A3P48764 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.01□□□□□ -0.17
SLC9A3P48764 AC012508.2-201ENST00000567613 1472 ntBASIC14.01□□□□□ -0.17
SLC9A3P48764 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC9A3P48764 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SLC9A3P48764 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC9A3P48764 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SLC9A3P48764 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SLC9A3P48764 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SLC9A3P48764 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.01□□□□□ -0.17
SLC9A3P48764 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SLC9A3P48764 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms