Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SNCAP37840 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.6□□□□□ -0.39
SNCAP37840 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SNCAP37840 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.6□□□□□ -0.39
SNCAP37840 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
SNCAP37840 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
SNCAP37840 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SNCAP37840 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SNCAP37840 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.59□□□□□ -0.39
SNCAP37840 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
SNCAP37840 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.59□□□□□ -0.39
SNCAP37840 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.59□□□□□ -0.39
SNCAP37840 FAM58CP-201ENST00000435741 640 ntBASIC12.59□□□□□ -0.39
SNCAP37840 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.59□□□□□ -0.39
SNCAP37840 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.59□□□□□ -0.39
SNCAP37840 KRT8P23-201ENST00000560090 1207 ntBASIC12.59□□□□□ -0.39
SNCAP37840 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.59□□□□□ -0.39
SNCAP37840 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.59□□□□□ -0.39
SNCAP37840 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.59□□□□□ -0.39
SNCAP37840 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.59□□□□□ -0.39
SNCAP37840 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
SNCAP37840 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.59□□□□□ -0.39
SNCAP37840 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 AL136982.4-201ENST00000437689 1740 ntBASIC12.59□□□□□ -0.39
SNCAP37840 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 FP325330.2-201ENST00000624219 5630 ntBASIC12.59□□□□□ -0.39
SNCAP37840 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.59□□□□□ -0.39
SNCAP37840 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SNCAP37840 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.59□□□□□ -0.39
SNCAP37840 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SNCAP37840 AC113367.3-201ENST00000508316 1912 ntBASIC12.58□□□□□ -0.39
SNCAP37840 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
SNCAP37840 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
SNCAP37840 FOXO1B-201ENST00000504678 1527 ntBASIC12.58□□□□□ -0.4
SNCAP37840 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.58□□□□□ -0.4
SNCAP37840 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SNCAP37840 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SNCAP37840 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
SNCAP37840 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SNCAP37840 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
SNCAP37840 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.58□□□□□ -0.4
SNCAP37840 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
SNCAP37840 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SNCAP37840 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.58□□□□□ -0.4
SNCAP37840 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.58□□□□□ -0.4
SNCAP37840 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.58□□□□□ -0.4
SNCAP37840 AC142381.1-201ENST00000426099 345 ntBASIC12.58□□□□□ -0.4
SNCAP37840 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.58□□□□□ -0.4
SNCAP37840 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms