Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.54□□□□□ -0.08
KRT20P35900 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT20P35900 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT20P35900 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.54□□□□□ -0.08
KRT20P35900 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.54□□□□□ -0.08
KRT20P35900 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
KRT20P35900 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
KRT20P35900 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.53□□□□□ -0.08
KRT20P35900 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
KRT20P35900 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.53□□□□□ -0.08
KRT20P35900 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.53□□□□□ -0.08
KRT20P35900 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
KRT20P35900 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.53□□□□□ -0.08
KRT20P35900 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
KRT20P35900 AC148477.4-201ENST00000613430 1793 ntBASIC14.53□□□□□ -0.08
KRT20P35900 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
KRT20P35900 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.53□□□□□ -0.08
KRT20P35900 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.53□□□□□ -0.08
KRT20P35900 AC015922.1-201ENST00000421102 1152 ntBASIC14.53□□□□□ -0.08
KRT20P35900 FAM8A3P-201ENST00000427218 844 ntBASIC14.53□□□□□ -0.08
KRT20P35900 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.53□□□□□ -0.08
KRT20P35900 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.53□□□□□ -0.08
KRT20P35900 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.53□□□□□ -0.08
KRT20P35900 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
KRT20P35900 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.53□□□□□ -0.08
KRT20P35900 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
KRT20P35900 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.53□□□□□ -0.08
KRT20P35900 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.53□□□□□ -0.08
KRT20P35900 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 AL355385.1-201ENST00000606123 409 ntBASIC14.53□□□□□ -0.08
KRT20P35900 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.53□□□□□ -0.08
KRT20P35900 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
KRT20P35900 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.53□□□□□ -0.08
KRT20P35900 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
KRT20P35900 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 AC041040.2-201ENST00000622926 2899 ntBASIC14.53□□□□□ -0.08
KRT20P35900 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
KRT20P35900 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.53□□□□□ -0.08
KRT20P35900 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.53□□□□□ -0.08
KRT20P35900 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 AC023024.2-201ENST00000623561 1993 ntBASIC14.53□□□□□ -0.08
KRT20P35900 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
KRT20P35900 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KRT20P35900 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KRT20P35900 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KRT20P35900 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KRT20P35900 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KRT20P35900 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
KRT20P35900 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.52□□□□□ -0.08
KRT20P35900 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.08
KRT20P35900 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KRT20P35900 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
KRT20P35900 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KRT20P35900 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
KRT20P35900 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.52□□□□□ -0.08
KRT20P35900 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
KRT20P35900 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
KRT20P35900 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KRT20P35900 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KRT20P35900 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.52□□□□□ -0.08
KRT20P35900 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KRT20P35900 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.52□□□□□ -0.08
KRT20P35900 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.52□□□□□ -0.08
KRT20P35900 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KRT20P35900 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KRT20P35900 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KRT20P35900 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.52□□□□□ -0.09
KRT20P35900 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.52□□□□□ -0.09
KRT20P35900 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.52□□□□□ -0.09
KRT20P35900 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms