Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 AL355994.2-201ENST00000447882 704 ntBASIC15.53■□□□□ 0.08
SLC6A4P31645 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 COX5BP1-201ENST00000507622 393 ntBASIC15.53■□□□□ 0.08
SLC6A4P31645 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC6A4P31645 RN7SL560P-201ENST00000577943 264 ntBASIC15.53■□□□□ 0.08
SLC6A4P31645 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 AGAP7P-201ENST00000582299 2062 ntBASIC15.53■□□□□ 0.08
SLC6A4P31645 AC023157.3-201ENST00000619086 2088 ntBASIC15.53■□□□□ 0.08
SLC6A4P31645 AGAP14-201ENST00000624701 2060 ntBASIC15.53■□□□□ 0.08
SLC6A4P31645 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC6A4P31645 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC6A4P31645 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SLC6A4P31645 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A4P31645 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.52■□□□□ 0.08
SLC6A4P31645 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A4P31645 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A4P31645 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC6A4P31645 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A4P31645 LINC00528-201ENST00000600723 2160 ntBASIC15.52■□□□□ 0.08
SLC6A4P31645 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC6A4P31645 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A4P31645 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A4P31645 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SLC6A4P31645 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A4P31645 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A4P31645 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC6A4P31645 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A4P31645 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A4P31645 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.52■□□□□ 0.08
SLC6A4P31645 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A4P31645 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A4P31645 FAM86MP-201ENST00000340703 885 ntBASIC15.52■□□□□ 0.08
SLC6A4P31645 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A4P31645 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SLC6A4P31645 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC6A4P31645 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SLC6A4P31645 FTLP10-202ENST00000505798 471 ntBASIC15.52■□□□□ 0.08
SLC6A4P31645 AC092658.1-201ENST00000505836 891 ntBASIC15.52■□□□□ 0.08
SLC6A4P31645 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC6A4P31645 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC6A4P31645 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.52■□□□□ 0.08
SLC6A4P31645 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.52■□□□□ 0.08
SLC6A4P31645 RN7SL713P-201ENST00000582127 302 ntBASIC15.52■□□□□ 0.08
SLC6A4P31645 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.52■□□□□ 0.08
SLC6A4P31645 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SLC6A4P31645 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A4P31645 AC144831.1-201ENST00000573312 2656 ntBASIC15.52■□□□□ 0.07
SLC6A4P31645 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A4P31645 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.52■□□□□ 0.07
SLC6A4P31645 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.52■□□□□ 0.07
SLC6A4P31645 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SLC6A4P31645 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A4P31645 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A4P31645 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SLC6A4P31645 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A4P31645 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A4P31645 AC104640.1-201ENST00000562617 2109 ntBASIC15.52■□□□□ 0.07
SLC6A4P31645 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SLC6A4P31645 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
SLC6A4P31645 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.52■□□□□ 0.07
SLC6A4P31645 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC6A4P31645 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
SLC6A4P31645 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC6A4P31645 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 FKBP4P6-201ENST00000457486 1332 ntBASIC15.51■□□□□ 0.07
SLC6A4P31645 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC6A4P31645 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
SLC6A4P31645 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC6A4P31645 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SLC6A4P31645 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SLC6A4P31645 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC6A4P31645 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC6A4P31645 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.51■□□□□ 0.07
SLC6A4P31645 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.51■□□□□ 0.07
SLC6A4P31645 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.51■□□□□ 0.07
SLC6A4P31645 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.51■□□□□ 0.07
SLC6A4P31645 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SLC6A4P31645 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms