Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTX3P26022 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTX3P26022 AL122018.1-201ENST00000446607 2310 ntBASIC14.61□□□□□ -0.07
PTX3P26022 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PTX3P26022 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTX3P26022 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.61□□□□□ -0.07
PTX3P26022 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTX3P26022 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PTX3P26022 AC067750.1-201ENST00000608826 6545 ntBASIC14.61□□□□□ -0.07
PTX3P26022 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTX3P26022 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTX3P26022 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTX3P26022 AC026748.1-201ENST00000624349 3251 ntBASIC14.61□□□□□ -0.07
PTX3P26022 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.61□□□□□ -0.07
PTX3P26022 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PTX3P26022 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.61□□□□□ -0.07
PTX3P26022 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTX3P26022 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.61□□□□□ -0.07
PTX3P26022 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PTX3P26022 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PTX3P26022 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTX3P26022 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTX3P26022 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
PTX3P26022 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.61□□□□□ -0.07
PTX3P26022 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.61□□□□□ -0.07
PTX3P26022 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.61□□□□□ -0.07
PTX3P26022 BCRP1-201ENST00000444246 691 ntBASIC14.61□□□□□ -0.07
PTX3P26022 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.61□□□□□ -0.07
PTX3P26022 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.61□□□□□ -0.07
PTX3P26022 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.61□□□□□ -0.07
PTX3P26022 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.61□□□□□ -0.07
PTX3P26022 AL132655.2-201ENST00000596276 594 ntBASIC14.61□□□□□ -0.07
PTX3P26022 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.61□□□□□ -0.07
PTX3P26022 BX539320.1-201ENST00000623759 877 ntBASIC14.61□□□□□ -0.07
PTX3P26022 AC008761.3-201ENST00000624803 892 ntBASIC14.61□□□□□ -0.07
PTX3P26022 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.61□□□□□ -0.07
PTX3P26022 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
PTX3P26022 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.61□□□□□ -0.07
PTX3P26022 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTX3P26022 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTX3P26022 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PTX3P26022 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.61□□□□□ -0.07
PTX3P26022 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.6□□□□□ -0.07
PTX3P26022 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PTX3P26022 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
PTX3P26022 AC007191.1-201ENST00000623179 2995 ntBASIC14.6□□□□□ -0.07
PTX3P26022 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.6□□□□□ -0.07
PTX3P26022 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.6□□□□□ -0.07
PTX3P26022 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.6□□□□□ -0.07
PTX3P26022 C1QBPP1-201ENST00000400117 770 ntBASIC14.6□□□□□ -0.07
PTX3P26022 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.6□□□□□ -0.07
PTX3P26022 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PTX3P26022 RN7SL204P-201ENST00000582831 262 ntBASIC14.6□□□□□ -0.07
PTX3P26022 AC007431.3-201ENST00000623221 587 ntBASIC14.6□□□□□ -0.07
PTX3P26022 PRSS30P-206ENST00000641773 873 ntBASIC14.6□□□□□ -0.07
PTX3P26022 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PTX3P26022 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PTX3P26022 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.6□□□□□ -0.07
PTX3P26022 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PTX3P26022 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
PTX3P26022 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
PTX3P26022 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.6□□□□□ -0.07
PTX3P26022 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
PTX3P26022 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PTX3P26022 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PTX3P26022 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
PTX3P26022 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
PTX3P26022 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PTX3P26022 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PTX3P26022 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms