Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CFTRP13569 AC139712.1-201ENST00000378256 1875 ntBASIC25.12■■□□□ 1.61
CFTRP13569 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC25.12■■□□□ 1.61
CFTRP13569 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CFTRP13569 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC25.12■■□□□ 1.61
CFTRP13569 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CFTRP13569 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CFTRP13569 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CFTRP13569 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC25.12■■□□□ 1.61
CFTRP13569 PPP1R2P4-201ENST00000424051 595 ntBASIC25.12■■□□□ 1.61
CFTRP13569 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CFTRP13569 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CFTRP13569 AC006548.2-201ENST00000605217 529 ntBASIC25.12■■□□□ 1.61
CFTRP13569 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC25.12■■□□□ 1.61
CFTRP13569 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC25.12■■□□□ 1.61
CFTRP13569 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CFTRP13569 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CFTRP13569 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC25.12■■□□□ 1.61
CFTRP13569 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CFTRP13569 KHSRPP1-201ENST00000427983 1768 ntBASIC25.12■■□□□ 1.61
CFTRP13569 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CFTRP13569 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CFTRP13569 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC25.11■■□□□ 1.61
CFTRP13569 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CFTRP13569 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CFTRP13569 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC25.11■■□□□ 1.61
CFTRP13569 AL357373.1-201ENST00000394974 322 ntBASIC25.11■■□□□ 1.61
CFTRP13569 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CFTRP13569 AC095040.1-201ENST00000513286 675 ntBASIC25.11■■□□□ 1.61
CFTRP13569 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC25.11■■□□□ 1.61
CFTRP13569 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC25.11■■□□□ 1.61
CFTRP13569 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC25.11■■□□□ 1.61
CFTRP13569 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC25.11■■□□□ 1.61
CFTRP13569 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CFTRP13569 BRD7P5-201ENST00000299197 1822 ntBASIC25.11■■□□□ 1.61
CFTRP13569 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC25.11■■□□□ 1.61
CFTRP13569 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC25.11■■□□□ 1.61
CFTRP13569 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
CFTRP13569 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CFTRP13569 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CFTRP13569 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC25.11■■□□□ 1.61
CFTRP13569 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CFTRP13569 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC25.11■■□□□ 1.61
CFTRP13569 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC25.11■■□□□ 1.61
CFTRP13569 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CFTRP13569 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CFTRP13569 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFTRP13569 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFTRP13569 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFTRP13569 FZD10-202ENST00000539839 3282 ntBASIC25.1■■□□□ 1.61
CFTRP13569 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFTRP13569 SSR4P1-203ENST00000599569 2260 ntBASIC25.1■■□□□ 1.61
CFTRP13569 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CFTRP13569 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFTRP13569 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CFTRP13569 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
CFTRP13569 MIR566-201ENST00000385187 94 ntBASIC25.1■■□□□ 1.61
CFTRP13569 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC25.1■■□□□ 1.61
CFTRP13569 ACTG1P19-201ENST00000418987 1116 ntBASIC25.1■■□□□ 1.61
CFTRP13569 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC25.1■■□□□ 1.61
CFTRP13569 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC25.1■■□□□ 1.61
CFTRP13569 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC25.1■■□□□ 1.61
CFTRP13569 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC25.1■■□□□ 1.61
CFTRP13569 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC25.1■■□□□ 1.61
CFTRP13569 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC25.1■■□□□ 1.61
CFTRP13569 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFTRP13569 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFTRP13569 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC25.1■■□□□ 1.61
CFTRP13569 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC25.1■■□□□ 1.61
CFTRP13569 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CFTRP13569 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC25.1■■□□□ 1.61
CFTRP13569 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CFTRP13569 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFTRP13569 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC25.1■■□□□ 1.61
CFTRP13569 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFTRP13569 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFTRP13569 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFTRP13569 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CFTRP13569 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CFTRP13569 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC25.09■■□□□ 1.61
CFTRP13569 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CFTRP13569 AC098934.1-203ENST00000442868 1262 ntBASIC25.09■■□□□ 1.61
CFTRP13569 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC25.09■■□□□ 1.61
CFTRP13569 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC25.09■■□□□ 1.61
CFTRP13569 RBM4-207ENST00000506523 654 ntTSL 3 BASIC25.09■■□□□ 1.61
CFTRP13569 AC010632.2-201ENST00000588369 1224 ntBASIC25.09■■□□□ 1.61
CFTRP13569 CYP4F36P-201ENST00000589193 186 ntBASIC25.09■■□□□ 1.61
CFTRP13569 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CFTRP13569 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CFTRP13569 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC25.09■■□□□ 1.61
CFTRP13569 PCDH8P1-201ENST00000428983 2773 ntBASIC25.09■■□□□ 1.61
CFTRP13569 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CFTRP13569 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CFTRP13569 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC25.09■■□□□ 1.61
CFTRP13569 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC25.09■■□□□ 1.61
CFTRP13569 LINC01101-201ENST00000622953 1884 ntBASIC25.09■■□□□ 1.61
CFTRP13569 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CFTRP13569 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC25.09■■□□□ 1.61
CFTRP13569 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CFTRP13569 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms