Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC100757.4-201ENST00000626934 759 ntBASIC15.32■□□□□ 0.04
RETP07949 REXO1L1P-202ENST00000608646 1974 ntBASIC15.32■□□□□ 0.04
RETP07949 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.32■□□□□ 0.04
RETP07949 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.32■□□□□ 0.04
RETP07949 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.32■□□□□ 0.04
RETP07949 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.32■□□□□ 0.04
RETP07949 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RETP07949 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.32■□□□□ 0.04
RETP07949 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RETP07949 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.31■□□□□ 0.04
RETP07949 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.31■□□□□ 0.04
RETP07949 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.31■□□□□ 0.04
RETP07949 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.31■□□□□ 0.04
RETP07949 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RETP07949 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 AC136621.1-201ENST00000624017 2304 ntBASIC15.31■□□□□ 0.04
RETP07949 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RETP07949 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.31■□□□□ 0.04
RETP07949 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RETP07949 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RETP07949 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.31■□□□□ 0.04
RETP07949 AC007274.2-201ENST00000421675 662 ntBASIC15.31■□□□□ 0.04
RETP07949 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.31■□□□□ 0.04
RETP07949 AC114501.1-201ENST00000445949 172 ntBASIC15.31■□□□□ 0.04
RETP07949 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
RETP07949 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.31■□□□□ 0.04
RETP07949 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.31■□□□□ 0.04
RETP07949 AC104784.1-201ENST00000473096 294 ntBASIC15.31■□□□□ 0.04
RETP07949 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.31■□□□□ 0.04
RETP07949 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.31■□□□□ 0.04
RETP07949 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.31■□□□□ 0.04
RETP07949 IQSEC3P1-201ENST00000538799 536 ntBASIC15.31■□□□□ 0.04
RETP07949 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.31■□□□□ 0.04
RETP07949 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.31■□□□□ 0.04
RETP07949 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.31■□□□□ 0.04
RETP07949 AC018635.2-201ENST00000608625 364 ntBASIC15.31■□□□□ 0.04
RETP07949 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.31■□□□□ 0.04
RETP07949 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.31■□□□□ 0.04
RETP07949 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RETP07949 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.31■□□□□ 0.04
RETP07949 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.31■□□□□ 0.04
RETP07949 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.31■□□□□ 0.04
RETP07949 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.31■□□□□ 0.04
RETP07949 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RETP07949 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RETP07949 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.3■□□□□ 0.04
RETP07949 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.3■□□□□ 0.04
RETP07949 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
RETP07949 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RETP07949 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RETP07949 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.3■□□□□ 0.04
RETP07949 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 SMS-201ENST00000379404 1174 ntTSL 3 BASIC15.3■□□□□ 0.04
RETP07949 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RETP07949 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.3■□□□□ 0.04
RETP07949 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.3■□□□□ 0.04
RETP07949 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RETP07949 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.3■□□□□ 0.04
RETP07949 AL596276.2-201ENST00000447525 331 ntBASIC15.3■□□□□ 0.04
RETP07949 AC114812.1-204ENST00000449669 728 ntBASIC15.3■□□□□ 0.04
RETP07949 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.3■□□□□ 0.04
RETP07949 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.3■□□□□ 0.04
RETP07949 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.3■□□□□ 0.04
RETP07949 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms