Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LCATP04180 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LCATP04180 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LCATP04180 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.35□□□□□ -0.27
LCATP04180 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 AJ011931.1-201ENST00000618749 2492 ntBASIC13.35□□□□□ -0.27
LCATP04180 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.35□□□□□ -0.27
LCATP04180 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.35□□□□□ -0.27
LCATP04180 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 MIR770-201ENST00000390219 98 ntBASIC13.35□□□□□ -0.27
LCATP04180 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.35□□□□□ -0.27
LCATP04180 GNAQP1-201ENST00000444815 1067 ntBASIC13.35□□□□□ -0.27
LCATP04180 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.35□□□□□ -0.27
LCATP04180 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.35□□□□□ -0.27
LCATP04180 RN7SL399P-201ENST00000471648 279 ntBASIC13.35□□□□□ -0.27
LCATP04180 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.35□□□□□ -0.27
LCATP04180 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.35□□□□□ -0.27
LCATP04180 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.35□□□□□ -0.27
LCATP04180 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.35□□□□□ -0.27
LCATP04180 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LCATP04180 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LCATP04180 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 LINC01101-201ENST00000622953 1884 ntBASIC13.35□□□□□ -0.27
LCATP04180 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.35□□□□□ -0.27
LCATP04180 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.35□□□□□ -0.27
LCATP04180 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.35□□□□□ -0.27
LCATP04180 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.35□□□□□ -0.27
LCATP04180 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.35□□□□□ -0.27
LCATP04180 REXO1L2P-201ENST00000425429 2069 ntBASIC13.35□□□□□ -0.27
LCATP04180 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.35□□□□□ -0.27
LCATP04180 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.35□□□□□ -0.27
LCATP04180 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
LCATP04180 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LCATP04180 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LCATP04180 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.34□□□□□ -0.27
LCATP04180 CICP24-201ENST00000605464 2705 ntBASIC13.34□□□□□ -0.27
LCATP04180 AC013726.1-201ENST00000563747 2285 ntBASIC13.34□□□□□ -0.27
LCATP04180 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.34□□□□□ -0.27
LCATP04180 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.34□□□□□ -0.27
LCATP04180 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LCATP04180 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LCATP04180 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
LCATP04180 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.34□□□□□ -0.27
LCATP04180 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LCATP04180 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.34□□□□□ -0.27
LCATP04180 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.34□□□□□ -0.27
LCATP04180 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LCATP04180 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.34□□□□□ -0.27
LCATP04180 AC104596.2-201ENST00000512793 793 ntBASIC13.34□□□□□ -0.27
LCATP04180 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.34□□□□□ -0.27
LCATP04180 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.34□□□□□ -0.27
LCATP04180 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
LCATP04180 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LCATP04180 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
LCATP04180 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LCATP04180 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.34□□□□□ -0.27
LCATP04180 AL391069.4-201ENST00000609583 481 ntBASIC13.34□□□□□ -0.27
LCATP04180 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.34□□□□□ -0.27
LCATP04180 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.34□□□□□ -0.27
LCATP04180 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms