Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.57■□□□□ 0.08
MT-ND3P03897 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.57■□□□□ 0.08
MT-ND3P03897 AL358472.5-202ENST00000641448 1267 ntBASIC15.57■□□□□ 0.08
MT-ND3P03897 AF228730.6-201ENST00000641497 218 ntBASIC15.57■□□□□ 0.08
MT-ND3P03897 AC084121.3-201ENST00000641716 218 ntBASIC15.57■□□□□ 0.08
MT-ND3P03897 AC105233.6-201ENST00000642093 218 ntBASIC15.57■□□□□ 0.08
MT-ND3P03897 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
MT-ND3P03897 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND3P03897 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
MT-ND3P03897 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND3P03897 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND3P03897 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.57■□□□□ 0.08
MT-ND3P03897 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND3P03897 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND3P03897 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.57■□□□□ 0.08
MT-ND3P03897 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND3P03897 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND3P03897 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
MT-ND3P03897 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.57■□□□□ 0.08
MT-ND3P03897 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.57■□□□□ 0.08
MT-ND3P03897 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 AC126335.2-201ENST00000623362 4637 ntBASIC15.56■□□□□ 0.08
MT-ND3P03897 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
MT-ND3P03897 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
MT-ND3P03897 MTHFR-210ENST00000641407 2387 ntBASIC15.56■□□□□ 0.08
MT-ND3P03897 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.56■□□□□ 0.08
MT-ND3P03897 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.56■□□□□ 0.08
MT-ND3P03897 AC015922.1-201ENST00000421102 1152 ntBASIC15.56■□□□□ 0.08
MT-ND3P03897 UGT1A2P-201ENST00000454886 866 ntBASIC15.56■□□□□ 0.08
MT-ND3P03897 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.56■□□□□ 0.08
MT-ND3P03897 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.56■□□□□ 0.08
MT-ND3P03897 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.56■□□□□ 0.08
MT-ND3P03897 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.56■□□□□ 0.08
MT-ND3P03897 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.56■□□□□ 0.08
MT-ND3P03897 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.56■□□□□ 0.08
MT-ND3P03897 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.56■□□□□ 0.08
MT-ND3P03897 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
MT-ND3P03897 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 BX640514.1-201ENST00000583223 1918 ntBASIC15.56■□□□□ 0.08
MT-ND3P03897 CETN4P-206ENST00000642099 2168 ntBASIC15.56■□□□□ 0.08
MT-ND3P03897 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.56■□□□□ 0.08
MT-ND3P03897 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
MT-ND3P03897 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.56■□□□□ 0.08
MT-ND3P03897 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MT-ND3P03897 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
MT-ND3P03897 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
MT-ND3P03897 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.55■□□□□ 0.08
MT-ND3P03897 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.55■□□□□ 0.08
MT-ND3P03897 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
MT-ND3P03897 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 AC063926.2-201ENST00000623766 1308 ntBASIC15.55■□□□□ 0.08
MT-ND3P03897 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.55■□□□□ 0.08
MT-ND3P03897 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
MT-ND3P03897 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.55■□□□□ 0.08
MT-ND3P03897 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.55■□□□□ 0.08
MT-ND3P03897 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.55■□□□□ 0.08
MT-ND3P03897 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.55■□□□□ 0.08
MT-ND3P03897 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.55■□□□□ 0.08
MT-ND3P03897 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.55■□□□□ 0.08
MT-ND3P03897 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.55■□□□□ 0.08
MT-ND3P03897 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.55■□□□□ 0.08
MT-ND3P03897 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.55■□□□□ 0.08
MT-ND3P03897 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.55■□□□□ 0.08
MT-ND3P03897 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.55■□□□□ 0.08
MT-ND3P03897 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.55■□□□□ 0.08
MT-ND3P03897 SPDYE12P-201ENST00000618416 771 ntBASIC15.55■□□□□ 0.08
MT-ND3P03897 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
MT-ND3P03897 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND3P03897 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
MT-ND3P03897 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.55■□□□□ 0.08
MT-ND3P03897 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
MT-ND3P03897 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms