Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 FAM8A3P-201ENST00000427218 844 ntBASIC13.73□□□□□ -0.21
HLA-DQA2P01906 GHSR-202ENST00000427970 912 ntBASIC13.73□□□□□ -0.21
HLA-DQA2P01906 KLF2P3-201ENST00000451977 1087 ntBASIC13.73□□□□□ -0.21
HLA-DQA2P01906 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 SDHAP3-202ENST00000515467 728 ntBASIC13.73□□□□□ -0.21
HLA-DQA2P01906 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 AL512361.1-201ENST00000554200 418 ntBASIC13.73□□□□□ -0.21
HLA-DQA2P01906 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 AC025181.2-201ENST00000606994 802 ntBASIC13.73□□□□□ -0.21
HLA-DQA2P01906 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 AC232323.1-201ENST00000540724 2099 ntBASIC13.73□□□□□ -0.21
HLA-DQA2P01906 REXO1L5P-201ENST00000622260 2098 ntBASIC13.73□□□□□ -0.21
HLA-DQA2P01906 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
HLA-DQA2P01906 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 ACE3P-201ENST00000423435 1973 ntBASIC13.72□□□□□ -0.21
HLA-DQA2P01906 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.72□□□□□ -0.21
HLA-DQA2P01906 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 AP000845.1-201ENST00000581677 2131 ntBASIC13.72□□□□□ -0.21
HLA-DQA2P01906 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 LINC00552-201ENST00000625151 2579 ntBASIC13.72□□□□□ -0.21
HLA-DQA2P01906 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 AC107890.1-201ENST00000422478 521 ntBASIC13.72□□□□□ -0.21
HLA-DQA2P01906 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 TIMM17BP1-201ENST00000545713 516 ntBASIC13.72□□□□□ -0.21
HLA-DQA2P01906 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.72□□□□□ -0.21
HLA-DQA2P01906 AL691403.2-201ENST00000618460 490 ntBASIC13.72□□□□□ -0.21
HLA-DQA2P01906 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 151.8 ms