Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBC1P01850 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBC1P01850 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBC1P01850 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBC1P01850 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.21■□□□□ 0.03
TRBC1P01850 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRBC1P01850 AC006058.4-201ENST00000624016 1670 ntBASIC15.21■□□□□ 0.03
TRBC1P01850 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBC1P01850 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
TRBC1P01850 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBC1P01850 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBC1P01850 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.21■□□□□ 0.02
TRBC1P01850 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.21■□□□□ 0.02
TRBC1P01850 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBC1P01850 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBC1P01850 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRBC1P01850 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRBC1P01850 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.2■□□□□ 0.02
TRBC1P01850 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBC1P01850 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.2■□□□□ 0.02
TRBC1P01850 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TRBC1P01850 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.2■□□□□ 0.02
TRBC1P01850 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 C2orf27AP3-201ENST00000434123 579 ntBASIC15.2■□□□□ 0.02
TRBC1P01850 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 AC007551.1-201ENST00000457394 519 ntBASIC15.2■□□□□ 0.02
TRBC1P01850 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TRBC1P01850 AC026434.2-201ENST00000506094 1078 ntBASIC15.2■□□□□ 0.02
TRBC1P01850 RAB43P1-201ENST00000561790 589 ntBASIC15.2■□□□□ 0.02
TRBC1P01850 RN7SL48P-201ENST00000579283 293 ntBASIC15.2■□□□□ 0.02
TRBC1P01850 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRBC1P01850 AL354718.3-201ENST00000616414 581 ntBASIC15.2■□□□□ 0.02
TRBC1P01850 AC132938.4-201ENST00000623835 848 ntBASIC15.2■□□□□ 0.02
TRBC1P01850 CR382287.1-201ENST00000623954 586 ntBASIC15.2■□□□□ 0.02
TRBC1P01850 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBC1P01850 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBC1P01850 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRBC1P01850 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBC1P01850 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBC1P01850 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBC1P01850 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBC1P01850 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRBC1P01850 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBC1P01850 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBC1P01850 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBC1P01850 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBC1P01850 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.19■□□□□ 0.02
TRBC1P01850 BOLA2P3-201ENST00000404566 256 ntBASIC15.19■□□□□ 0.02
TRBC1P01850 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRBC1P01850 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRBC1P01850 GPR53P-205ENST00000457298 1084 ntBASIC15.19■□□□□ 0.02
TRBC1P01850 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBC1P01850 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.19■□□□□ 0.02
TRBC1P01850 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRBC1P01850 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.19■□□□□ 0.02
TRBC1P01850 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBC1P01850 AL512343.1-201ENST00000605837 169 ntBASIC15.19■□□□□ 0.02
TRBC1P01850 AC244669.2-201ENST00000612320 853 ntBASIC15.19■□□□□ 0.02
TRBC1P01850 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRBC1P01850 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBC1P01850 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBC1P01850 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBC1P01850 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBC1P01850 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBC1P01850 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBC1P01850 AL161772.1-201ENST00000610494 4412 ntBASIC15.19■□□□□ 0.02
TRBC1P01850 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBC1P01850 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBC1P01850 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms