Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLIC3O95833 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLIC3O95833 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.1□□□□□ -0.15
CLIC3O95833 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CLIC3O95833 AC004899.2-201ENST00000622993 3860 ntBASIC14.1□□□□□ -0.15
CLIC3O95833 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLIC3O95833 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.1□□□□□ -0.15
CLIC3O95833 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLIC3O95833 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLIC3O95833 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLIC3O95833 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIC3O95833 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.09□□□□□ -0.15
CLIC3O95833 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIC3O95833 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CLIC3O95833 FAM90A12P-201ENST00000519497 2375 ntBASIC14.09□□□□□ -0.15
CLIC3O95833 FAM90A24P-201ENST00000520792 2369 ntBASIC14.09□□□□□ -0.15
CLIC3O95833 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIC3O95833 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIC3O95833 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CLIC3O95833 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIC3O95833 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIC3O95833 CRYGEP-201ENST00000412192 528 ntBASIC14.09□□□□□ -0.15
CLIC3O95833 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.09□□□□□ -0.15
CLIC3O95833 AC018712.1-201ENST00000455767 687 ntBASIC14.09□□□□□ -0.15
CLIC3O95833 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.09□□□□□ -0.15
CLIC3O95833 AC092910.1-201ENST00000482027 1129 ntBASIC14.09□□□□□ -0.15
CLIC3O95833 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.09□□□□□ -0.15
CLIC3O95833 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLIC3O95833 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIC3O95833 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLIC3O95833 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLIC3O95833 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.09□□□□□ -0.15
CLIC3O95833 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CLIC3O95833 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.09□□□□□ -0.15
CLIC3O95833 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLIC3O95833 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.09□□□□□ -0.15
CLIC3O95833 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.09□□□□□ -0.15
CLIC3O95833 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CLIC3O95833 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.09□□□□□ -0.15
CLIC3O95833 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLIC3O95833 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.08□□□□□ -0.15
CLIC3O95833 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLIC3O95833 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLIC3O95833 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
CLIC3O95833 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLIC3O95833 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLIC3O95833 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CLIC3O95833 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
CLIC3O95833 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLIC3O95833 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.08□□□□□ -0.16
CLIC3O95833 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CLIC3O95833 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIC3O95833 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CLIC3O95833 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIC3O95833 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.08□□□□□ -0.16
CLIC3O95833 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.08□□□□□ -0.16
CLIC3O95833 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIC3O95833 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CLIC3O95833 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIC3O95833 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIC3O95833 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.08□□□□□ -0.16
CLIC3O95833 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIC3O95833 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CLIC3O95833 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.08□□□□□ -0.16
CLIC3O95833 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.08□□□□□ -0.16
CLIC3O95833 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.08□□□□□ -0.16
CLIC3O95833 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.08□□□□□ -0.16
CLIC3O95833 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.08□□□□□ -0.16
CLIC3O95833 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.08□□□□□ -0.16
CLIC3O95833 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.08□□□□□ -0.16
CLIC3O95833 AL161645.1-201ENST00000622716 1255 ntBASIC14.08□□□□□ -0.16
CLIC3O95833 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIC3O95833 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLIC3O95833 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIC3O95833 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLIC3O95833 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.08□□□□□ -0.16
CLIC3O95833 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.08□□□□□ -0.16
CLIC3O95833 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.08□□□□□ -0.16
CLIC3O95833 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.08□□□□□ -0.16
CLIC3O95833 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.08□□□□□ -0.16
CLIC3O95833 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
CLIC3O95833 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms