Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.19■□□□□ 0.02
NDUFS3O75489 AL158070.2-201ENST00000623713 1621 ntBASIC15.19■□□□□ 0.02
NDUFS3O75489 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.19■□□□□ 0.02
NDUFS3O75489 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 AL645937.2-201ENST00000396808 931 ntBASIC15.19■□□□□ 0.02
NDUFS3O75489 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.19■□□□□ 0.02
NDUFS3O75489 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.19■□□□□ 0.02
NDUFS3O75489 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.19■□□□□ 0.02
NDUFS3O75489 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.19■□□□□ 0.02
NDUFS3O75489 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.19■□□□□ 0.02
NDUFS3O75489 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.19■□□□□ 0.02
NDUFS3O75489 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.19■□□□□ 0.02
NDUFS3O75489 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.19■□□□□ 0.02
NDUFS3O75489 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.19■□□□□ 0.02
NDUFS3O75489 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.19■□□□□ 0.02
NDUFS3O75489 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.19■□□□□ 0.02
NDUFS3O75489 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.19■□□□□ 0.02
NDUFS3O75489 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
NDUFS3O75489 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
NDUFS3O75489 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NDUFS3O75489 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.19■□□□□ 0.02
NDUFS3O75489 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NDUFS3O75489 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.19■□□□□ 0.02
NDUFS3O75489 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NDUFS3O75489 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.19■□□□□ 0.02
NDUFS3O75489 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
NDUFS3O75489 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
NDUFS3O75489 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
NDUFS3O75489 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
NDUFS3O75489 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
NDUFS3O75489 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.18■□□□□ 0.02
NDUFS3O75489 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
NDUFS3O75489 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.18■□□□□ 0.02
NDUFS3O75489 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NDUFS3O75489 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
NDUFS3O75489 C1QBPP1-201ENST00000400117 770 ntBASIC15.18■□□□□ 0.02
NDUFS3O75489 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.18■□□□□ 0.02
NDUFS3O75489 NUS1P3-201ENST00000423502 862 ntBASIC15.18■□□□□ 0.02
NDUFS3O75489 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.18■□□□□ 0.02
NDUFS3O75489 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.18■□□□□ 0.02
NDUFS3O75489 AL442647.2-201ENST00000429864 857 ntBASIC15.18■□□□□ 0.02
NDUFS3O75489 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
NDUFS3O75489 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.18■□□□□ 0.02
NDUFS3O75489 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NDUFS3O75489 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFS3O75489 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.18■□□□□ 0.02
NDUFS3O75489 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.18■□□□□ 0.02
NDUFS3O75489 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 SPCS2P1-201ENST00000561636 679 ntBASIC15.18■□□□□ 0.02
NDUFS3O75489 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFS3O75489 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.18■□□□□ 0.02
NDUFS3O75489 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.18■□□□□ 0.02
NDUFS3O75489 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.18■□□□□ 0.02
NDUFS3O75489 BX539320.1-201ENST00000623759 877 ntBASIC15.18■□□□□ 0.02
NDUFS3O75489 AC008761.3-201ENST00000624803 892 ntBASIC15.18■□□□□ 0.02
NDUFS3O75489 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
NDUFS3O75489 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFS3O75489 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFS3O75489 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NDUFS3O75489 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NDUFS3O75489 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.18■□□□□ 0.02
NDUFS3O75489 AL157414.3-201ENST00000624276 1954 ntBASIC15.18■□□□□ 0.02
NDUFS3O75489 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.18■□□□□ 0.02
NDUFS3O75489 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
NDUFS3O75489 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.18■□□□□ 0.02
NDUFS3O75489 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NDUFS3O75489 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms