Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LDB3O75112 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.31□□□□□ -0.12
LDB3O75112 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LDB3O75112 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.31□□□□□ -0.12
LDB3O75112 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LDB3O75112 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LDB3O75112 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LDB3O75112 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LDB3O75112 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.31□□□□□ -0.12
LDB3O75112 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.31□□□□□ -0.12
LDB3O75112 AC005034.1-201ENST00000426657 489 ntBASIC14.31□□□□□ -0.12
LDB3O75112 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.31□□□□□ -0.12
LDB3O75112 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.31□□□□□ -0.12
LDB3O75112 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LDB3O75112 AC012441.1-201ENST00000446669 685 ntBASIC14.31□□□□□ -0.12
LDB3O75112 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.31□□□□□ -0.12
LDB3O75112 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.31□□□□□ -0.12
LDB3O75112 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.31□□□□□ -0.12
LDB3O75112 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.31□□□□□ -0.12
LDB3O75112 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LDB3O75112 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LDB3O75112 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LDB3O75112 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LDB3O75112 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LDB3O75112 KRT8P35-201ENST00000483942 1338 ntBASIC14.31□□□□□ -0.12
LDB3O75112 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LDB3O75112 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.31□□□□□ -0.12
LDB3O75112 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LDB3O75112 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
LDB3O75112 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
LDB3O75112 AJ011931.1-201ENST00000618749 2492 ntBASIC14.31□□□□□ -0.12
LDB3O75112 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
LDB3O75112 AC023824.1-201ENST00000562945 2975 ntBASIC14.31□□□□□ -0.12
LDB3O75112 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.31□□□□□ -0.12
LDB3O75112 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LDB3O75112 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.3□□□□□ -0.12
LDB3O75112 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 MYO15B-237ENST00000642007 4893 ntBASIC14.3□□□□□ -0.12
LDB3O75112 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.3□□□□□ -0.12
LDB3O75112 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.3□□□□□ -0.12
LDB3O75112 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.3□□□□□ -0.12
LDB3O75112 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LDB3O75112 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.3□□□□□ -0.12
LDB3O75112 ACTBP8-201ENST00000403258 1108 ntBASIC14.3□□□□□ -0.12
LDB3O75112 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 CR383656.12-201ENST00000549567 513 ntBASIC14.3□□□□□ -0.12
LDB3O75112 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.3□□□□□ -0.12
LDB3O75112 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.3□□□□□ -0.12
LDB3O75112 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.3□□□□□ -0.12
LDB3O75112 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.3□□□□□ -0.12
LDB3O75112 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 AL035252.4-201ENST00000624174 288 ntBASIC14.3□□□□□ -0.12
LDB3O75112 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.3□□□□□ -0.12
LDB3O75112 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.3□□□□□ -0.12
LDB3O75112 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
LDB3O75112 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LDB3O75112 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.3□□□□□ -0.12
LDB3O75112 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.3□□□□□ -0.12
LDB3O75112 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LDB3O75112 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LDB3O75112 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.3□□□□□ -0.12
LDB3O75112 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LDB3O75112 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.3□□□□□ -0.12
LDB3O75112 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LDB3O75112 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LDB3O75112 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LDB3O75112 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.29□□□□□ -0.12
LDB3O75112 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LDB3O75112 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
LDB3O75112 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 221.1 ms