Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP2AO43633 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP2AO43633 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP2AO43633 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP2AO43633 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.09■□□□□ 0.33
CHMP2AO43633 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHMP2AO43633 AC078819.1-201ENST00000547454 765 ntBASIC17.09■□□□□ 0.33
CHMP2AO43633 AC012085.1-201ENST00000548270 765 ntBASIC17.09■□□□□ 0.33
CHMP2AO43633 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.09■□□□□ 0.33
CHMP2AO43633 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.09■□□□□ 0.33
CHMP2AO43633 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.09■□□□□ 0.33
CHMP2AO43633 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP2AO43633 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP2AO43633 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP2AO43633 MROH4P-201ENST00000431302 1578 ntBASIC17.09■□□□□ 0.33
CHMP2AO43633 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CHMP2AO43633 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP2AO43633 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP2AO43633 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.09■□□□□ 0.33
CHMP2AO43633 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHMP2AO43633 AC006486.2-201ENST00000624246 2199 ntBASIC17.09■□□□□ 0.33
CHMP2AO43633 AC126177.1-201ENST00000547829 2218 ntBASIC17.09■□□□□ 0.33
CHMP2AO43633 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP2AO43633 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP2AO43633 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHMP2AO43633 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP2AO43633 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP2AO43633 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP2AO43633 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP2AO43633 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CHMP2AO43633 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
CHMP2AO43633 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP2AO43633 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.08■□□□□ 0.33
CHMP2AO43633 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP2AO43633 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP2AO43633 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP2AO43633 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.08■□□□□ 0.33
CHMP2AO43633 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CHMP2AO43633 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP2AO43633 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP2AO43633 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP2AO43633 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP2AO43633 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP2AO43633 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP2AO43633 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP2AO43633 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP2AO43633 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CHMP2AO43633 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.08■□□□□ 0.32
CHMP2AO43633 BNIP3P42-201ENST00000454982 569 ntBASIC17.08■□□□□ 0.32
CHMP2AO43633 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP2AO43633 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP2AO43633 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.08■□□□□ 0.32
CHMP2AO43633 AP005482.1-201ENST00000563722 1273 ntBASIC17.08■□□□□ 0.32
CHMP2AO43633 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.08■□□□□ 0.32
CHMP2AO43633 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP2AO43633 BNIP3P29-201ENST00000598302 571 ntBASIC17.08■□□□□ 0.32
CHMP2AO43633 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.08■□□□□ 0.32
CHMP2AO43633 AC011447.5-201ENST00000616168 564 ntBASIC17.08■□□□□ 0.32
CHMP2AO43633 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.08■□□□□ 0.32
CHMP2AO43633 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.08■□□□□ 0.32
CHMP2AO43633 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP2AO43633 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP2AO43633 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP2AO43633 AC011270.2-201ENST00000624293 2550 ntBASIC17.08■□□□□ 0.32
CHMP2AO43633 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP2AO43633 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP2AO43633 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP2AO43633 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP2AO43633 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP2AO43633 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP2AO43633 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.07■□□□□ 0.32
CHMP2AO43633 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.07■□□□□ 0.32
CHMP2AO43633 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.07■□□□□ 0.32
CHMP2AO43633 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
CHMP2AO43633 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.07■□□□□ 0.32
CHMP2AO43633 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.07■□□□□ 0.32
CHMP2AO43633 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP2AO43633 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CHMP2AO43633 AC099336.1-201ENST00000417053 1171 ntBASIC17.07■□□□□ 0.32
CHMP2AO43633 HLA-V-201ENST00000429037 534 ntBASIC17.07■□□□□ 0.32
CHMP2AO43633 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CHMP2AO43633 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.07■□□□□ 0.32
CHMP2AO43633 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.07■□□□□ 0.32
CHMP2AO43633 AP000812.2-201ENST00000538934 718 ntBASIC17.07■□□□□ 0.32
CHMP2AO43633 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.07■□□□□ 0.32
CHMP2AO43633 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.07■□□□□ 0.32
CHMP2AO43633 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.07■□□□□ 0.32
CHMP2AO43633 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
CHMP2AO43633 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CHMP2AO43633 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms